Gene PMT9312_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0094 
Symbol 
ID3764877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp96830 
End bp97951 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content31% 
IMG OID637796598 
ProductPDZ/DHR/GLGF 
Protein accessionYP_396591 
Protein GI78778479 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0532593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACTTT ACAGACACAA GAAGTTATTA TTCTCCTCAG CAATCACAAT TGGTATTATA 
TGTCCTTCAA ATATAATATC TGGACCATTA ACTAATCCAA GATTTAATGA AAATAATACG
TATTCACACA AATCATTCAT AACTAAAGCT GTAGAAAAAA CTGGTTCTTC TGTTGTGACA
ATTGATACTC AAAGATATAT TAAAAAAAGA AAGTTTCCAA AAAATTCTCA ACTATTTATA
GACCCATATT TTGAAAGATT TTTTGGATTA GACTTACCTA ACGATAATCA GCCAAGGATA
GAGCAAAACC AAGGAAGTGG GTTTATATTC GCAGACGGAC TTGTAATGAC TAATGCTCAT
GTTGTAAATG AATCGGATAA GGTAATTGTT GGTTTAACCA ATGGGGAAAA ATTAAAAGCA
AAACTCATAG GGCAAGACTT TTTTACTGAT TTAGCTGTGC TCAAGATTGA AGGGAAAGGG
CCTTGGCCAA AAGCAAAGTT GGGCGATTCA GCAAAAATTA AAGTTGGTGA TTGGGCAATC
GCAGTAGGAA ATCCATTCGG ACTGGAAAAC ACAGTTACAC TTGGTATTAT CAGCAATATA
AAAAGAAACG TCACTCAACT AGGAATATAC GATAAAAAAC TTGAGTTAAT TCAAACTGAT
GCTGCTATCA ATCCCGGAAA TTCAGGAGGT CCACTACTGA ATAGTAATGG AGAAGTAATT
GGTATTAATA CCTTGATCAG ATCAGGTCCA GGAGCAGGTT TAAGTTTCGC AATCCCAATT
AATAAAGCCA AGGAAATTGC ATATCAGCTA ATAAATAATG GAAAAGTAAT ACATCCTATG
ATTGGTATAA GCCTAATAGA TGACAGTAAT TCTGAAACAA ATAATAGTTC CGTAAAAGTT
GGTTATGTAG TACCAAATAG TCCAGCTGAA AAGAGTGGAA TCAAAGTAAA TGACATAATC
ATAAAAGTGG GTAATAAAAA TATTCAGAAA GTTTCAGATG TTATTAACCA AATAACTAAA
AATGGTATTA ATAAACAAAT AAAAATATTA TTGAAACGTA GAAATAAATT TATTATGTTA
AAAGTAATAC CAACTGATAT TACTAATCTA CAAAATAACT AA
 
Protein sequence
MKLYRHKKLL FSSAITIGII CPSNIISGPL TNPRFNENNT YSHKSFITKA VEKTGSSVVT 
IDTQRYIKKR KFPKNSQLFI DPYFERFFGL DLPNDNQPRI EQNQGSGFIF ADGLVMTNAH
VVNESDKVIV GLTNGEKLKA KLIGQDFFTD LAVLKIEGKG PWPKAKLGDS AKIKVGDWAI
AVGNPFGLEN TVTLGIISNI KRNVTQLGIY DKKLELIQTD AAINPGNSGG PLLNSNGEVI
GINTLIRSGP GAGLSFAIPI NKAKEIAYQL INNGKVIHPM IGISLIDDSN SETNNSSVKV
GYVVPNSPAE KSGIKVNDII IKVGNKNIQK VSDVINQITK NGINKQIKIL LKRRNKFIML
KVIPTDITNL QNN