Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0094 |
Symbol | |
ID | 3764877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 96830 |
End bp | 97951 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637796598 |
Product | PDZ/DHR/GLGF |
Protein accession | YP_396591 |
Protein GI | 78778479 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0532593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTTT ACAGACACAA GAAGTTATTA TTCTCCTCAG CAATCACAAT TGGTATTATA TGTCCTTCAA ATATAATATC TGGACCATTA ACTAATCCAA GATTTAATGA AAATAATACG TATTCACACA AATCATTCAT AACTAAAGCT GTAGAAAAAA CTGGTTCTTC TGTTGTGACA ATTGATACTC AAAGATATAT TAAAAAAAGA AAGTTTCCAA AAAATTCTCA ACTATTTATA GACCCATATT TTGAAAGATT TTTTGGATTA GACTTACCTA ACGATAATCA GCCAAGGATA GAGCAAAACC AAGGAAGTGG GTTTATATTC GCAGACGGAC TTGTAATGAC TAATGCTCAT GTTGTAAATG AATCGGATAA GGTAATTGTT GGTTTAACCA ATGGGGAAAA ATTAAAAGCA AAACTCATAG GGCAAGACTT TTTTACTGAT TTAGCTGTGC TCAAGATTGA AGGGAAAGGG CCTTGGCCAA AAGCAAAGTT GGGCGATTCA GCAAAAATTA AAGTTGGTGA TTGGGCAATC GCAGTAGGAA ATCCATTCGG ACTGGAAAAC ACAGTTACAC TTGGTATTAT CAGCAATATA AAAAGAAACG TCACTCAACT AGGAATATAC GATAAAAAAC TTGAGTTAAT TCAAACTGAT GCTGCTATCA ATCCCGGAAA TTCAGGAGGT CCACTACTGA ATAGTAATGG AGAAGTAATT GGTATTAATA CCTTGATCAG ATCAGGTCCA GGAGCAGGTT TAAGTTTCGC AATCCCAATT AATAAAGCCA AGGAAATTGC ATATCAGCTA ATAAATAATG GAAAAGTAAT ACATCCTATG ATTGGTATAA GCCTAATAGA TGACAGTAAT TCTGAAACAA ATAATAGTTC CGTAAAAGTT GGTTATGTAG TACCAAATAG TCCAGCTGAA AAGAGTGGAA TCAAAGTAAA TGACATAATC ATAAAAGTGG GTAATAAAAA TATTCAGAAA GTTTCAGATG TTATTAACCA AATAACTAAA AATGGTATTA ATAAACAAAT AAAAATATTA TTGAAACGTA GAAATAAATT TATTATGTTA AAAGTAATAC CAACTGATAT TACTAATCTA CAAAATAACT AA
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Protein sequence | MKLYRHKKLL FSSAITIGII CPSNIISGPL TNPRFNENNT YSHKSFITKA VEKTGSSVVT IDTQRYIKKR KFPKNSQLFI DPYFERFFGL DLPNDNQPRI EQNQGSGFIF ADGLVMTNAH VVNESDKVIV GLTNGEKLKA KLIGQDFFTD LAVLKIEGKG PWPKAKLGDS AKIKVGDWAI AVGNPFGLEN TVTLGIISNI KRNVTQLGIY DKKLELIQTD AAINPGNSGG PLLNSNGEVI GINTLIRSGP GAGLSFAIPI NKAKEIAYQL INNGKVIHPM IGISLIDDSN SETNNSSVKV GYVVPNSPAE KSGIKVNDII IKVGNKNIQK VSDVINQITK NGINKQIKIL LKRRNKFIML KVIPTDITNL QNN
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