Gene Suden_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1947 
Symbol 
ID3762951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp2030982 
End bp2032244 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content40% 
IMG OID 
Productserine hydroxymethyltransferase 
Protein accessionYP_394456 
Protein GI78778141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.961432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTA TATCAAGCAA AAGTTTAGAA CATGCGGACA GGGAAGTATT TTCAATCATA 
GAAGGCGAGT TAAAGAGGCA AACTGCTCAC TTAGAGATGA TTGCCAGTGA AAACTTTACA
AGTCCGGCGG TTATGGAAGC TATGGGAAGC GTATTTACAA ACAAGTACGC TGAGGGTTAT
CCATACAAGA GATATTATGG CGGTTGCGAA TATGCTGATG CTGTTGAGCA GTTAGCTATT
GATAGAGCTT GTGAGATATT TGGCTGTAAA TTTGCAAATG TTCAACCACA CTCAGGAAGT
CAAGCAAATG CAGCTGTTTA TGCGGCACTT CTAAAGGCTG GTGACAAACT CTTAGGTATG
GATTTAAGTC ATGGCGGACA CTTGACACAT GGTAGCAAAC CGAGCTTTTC AGGGCAAAAC
TACTCAAGTT TTACTTATGG TGTTGAGGCA GACGGAAGAA TGGACTATGA TAAAATCTTA
GAAATCGCAA AAGCAGTTCA ACCAAAGATT ATCGTTTGTG GAGCATCGGC TTATGCTAGA
GAGATAGACT TTAAAAAATT CCGTGAAATT GCTGATGCTG TTGGAGCTTT TCTTTTTGCA
GATATCGCTC ATGTGGCTGG TTTAGTCGCG GCAGATGAGC ATATGAGTCC ATTTCCTCAC
GCTCATGTAG TAACAACAAC TACTCATAAG ACTCTAAGAG GTCCAAGAGG CGGTATGATT
ATGACAGATG ATGAAGAGAT AGCAAAGAAG ATAAACTCTG CTATTTTCCC AGGTATTCAA
GGTGGTCCGC TTGTACATGT TATCGCTGCA AAAGCTGTTG CATTTAAAGA GATACTAGAC
CCGTCATGGA GAGAGTATGC AAAACAAGTA AAGGCAAATG CAAAAGTGCT TGAAGTTGTT
TTAACAAAAA GAGGTTATGA TTTGGTCTCT GGCGGAACGG ACAACCACTT AGTGTTGGTG
TCGTTTTTAA ACAGAGATTT CTCAGGTAAA GATGCAGATG CAGCGCTGGA GAGAGCGGGA
ATCACAGTAA ACAAAAACGG TGTTCCAAAC GACACAAGAA GCCCTTTTAT AACAAGCGGT
ATCCGTATAG GAAGCCCAGC ACTAACGGCT AGAGGTATGA AAGAAGCAGA GTTTGAACTT
ATCGCAAACA AAATCTGCGA TGTTTTGGAT AATATAAACG ATACAGAGCT ACATGTAAAG
ATAAACAAAG AGTTAGAAGA GTTAGCAAAG GGCTTTGTGA TTTATAATAA ATCAACTTTT
TAA
 
Protein sequence
MSFISSKSLE HADREVFSII EGELKRQTAH LEMIASENFT SPAVMEAMGS VFTNKYAEGY 
PYKRYYGGCE YADAVEQLAI DRACEIFGCK FANVQPHSGS QANAAVYAAL LKAGDKLLGM
DLSHGGHLTH GSKPSFSGQN YSSFTYGVEA DGRMDYDKIL EIAKAVQPKI IVCGASAYAR
EIDFKKFREI ADAVGAFLFA DIAHVAGLVA ADEHMSPFPH AHVVTTTTHK TLRGPRGGMI
MTDDEEIAKK INSAIFPGIQ GGPLVHVIAA KAVAFKEILD PSWREYAKQV KANAKVLEVV
LTKRGYDLVS GGTDNHLVLV SFLNRDFSGK DADAALERAG ITVNKNGVPN DTRSPFITSG
IRIGSPALTA RGMKEAEFEL IANKICDVLD NINDTELHVK INKELEELAK GFVIYNKSTF