Gene Suden_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1858 
Symbol 
ID3762691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand- 
Start bp1942180 
End bp1942860 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content33% 
IMG OID 
ProductMerR family transcriptional regulator 
Protein accessionYP_394367 
Protein GI78778052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.14067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA AAGTATCTCA AATAGTAAAA CTTACTCAAA CTCCAAAATC AACAATTTTA 
TACTACATAA GAGAAGGGTT ACTTCCAGAG GCAAAAAAAC TAAAATCAAA CGTTCATAGA 
TACTCAGATA TACATGTAGA GATTTTAGAG TATATACGCT ACATGAAGCA AGAGATGGGG 
AGCTCTAACG AAGAGCTCAA AACAATGCTA AAAAATAAAA ACAGCTCTTT ATCCAGCTCT 
TTTTCGATGA TAGCACCCAT GATGCAGACA CTAGAAAATA TCCCAAAAAA TGCAAAACAC 
TACACAAAAG AGGAGTTTTT AAATGAGTAT AATATTGAGA GAGAGTTTTT AGAAGAGCTA 
TTAAAAGATG ATATTTTAAT GCCTCTAGGG AGTGATGACT TTACGCAAAA AGAGGCTTCT 
CTAATCAAGC TTGTAAAAAA CTTTCAAGAG ATGGGAGTTG AGCATAACAT CCTAAGCGAG 
TATGTTGCTC ACGCAAAAGC TTTAGCAGAA CTTGAATACA AAATGCAGAA AAATTTATGT 
GCAATTAGAG ATGATGATAA CTTTCAAACT CTATGGAAAA TCATGTTTGA GACACTCTTT 
GGTGCAAAAG AGTACATACA TAAGCGCTCA ACACATAAAG TTTTATATAA GGCTCTCAAA 
GAGGAGATTT CAAAAAAGTA A
 
Protein sequence
MKYKVSQIVK LTQTPKSTIL YYIREGLLPE AKKLKSNVHR YSDIHVEILE YIRYMKQEMG 
SSNEELKTML KNKNSSLSSS FSMIAPMMQT LENIPKNAKH YTKEEFLNEY NIEREFLEEL 
LKDDILMPLG SDDFTQKEAS LIKLVKNFQE MGVEHNILSE YVAHAKALAE LEYKMQKNLC 
AIRDDDNFQT LWKIMFETLF GAKEYIHKRS THKVLYKALK EEISKK