Gene Suden_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1856 
Symbol 
ID3762689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand+ 
Start bp1940540 
End bp1941247 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content40% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_394365 
Protein GI78778050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.21396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGACA AAATAGTTTT GGTAACAGGG GCAAACGGTG GGCTTGGGAA TGCTTTTGTT 
CAGGTTCTCT TAGAGCAAAA AGCAAAAAAG ATTTATGCGG CTGCTAGAGA TATAGGCTCC 
CTTGCGCATT TAAAAGATAT AAGCAATATT GAACTCTTAG AGCTTGATAT TACCGATATT 
ACATCTATAA AGGCGGCAAG AGAGAAGGCG AGCGATATAG ATGTGCTAAT AAACAATGCT 
GGTGTTAACT CCAACTCAAG AGTTTTTGAT GGCGATTTTA TCGATTTGCA AGTCAACTAC 
AAAGGTACGG CAAGCCTCTG CAAAAGCTAC TTTGAGTACG CAAAAGAGCA TAAGCTACAA 
ATCATCAACA TCTCTTCCAT AGTCGCTCTT TGCAATCTCC CTTTGATGGC AAAGTACTCC 
ATCTCTAAAA GCGCTTTGCA CTCCTTTACA CAAGCTCTAA GAGCTGAGTT AAAAGCCTAT 
GGTAGCGAAG TTTATGAGGT TTTTGCTGGA CCAATTGACA CAAGATTAAC AGAGGGAGTT 
GACATGCCAA AAGCAGATCC TATTGATGTG GCAAAAAAGG TTCTAAAAGA TGTTAAAGCG 
GGTGAGTTTG ATATATTTCC AGACGTTTTT GCCCAGATGA TAAAAGAGAG ACTTGCCTCT 
GAGCCAAAAA TGGTAGAAGC AGACTTTAGT ATGTCGATTG TTGGTTAA
 
Protein sequence
MQDKIVLVTG ANGGLGNAFV QVLLEQKAKK IYAAARDIGS LAHLKDISNI ELLELDITDI 
TSIKAAREKA SDIDVLINNA GVNSNSRVFD GDFIDLQVNY KGTASLCKSY FEYAKEHKLQ 
IINISSIVAL CNLPLMAKYS ISKSALHSFT QALRAELKAY GSEVYEVFAG PIDTRLTEGV 
DMPKADPIDV AKKVLKDVKA GEFDIFPDVF AQMIKERLAS EPKMVEADFS MSIVG