Gene Suden_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1021 
Symbol 
ID3764001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1074900 
End bp1076546 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content31% 
IMG OID 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_393534 
Protein GI78777219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.69997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA TATTTTTTTA TCTACTTATC GCCTCATCAC TACTCTTTAG CGATATTTTA 
AAGAGTGAGG TAAAGCCTAC TCAAGAAGAG CTAGAACGTA TAAAAATAGA GCAAGAGAGA
GCTGTAAAAG ATAAAATTTC TCAACTTGTC TCAGAGTTAA AAGTTATTGA AGAGAGGATT
TCTAAAAGAG ATAGTGTTTG GATAAAGAGT TATGCCTCTT ATCTTACCTC TTTGGAAGTT
CGAGAGAGTC TTGATAAAAT TGTGGAGAGA ATTAACTATC TTCAAAAAAA GAGAGATAAA
TCACTTAGTG AAGCAGATGA GCTAAATGCG CTTCTTGGTC GTGAGAAGAT TTTAACATCA
CAAATTGAGA AATTAAAAAG AAAAGATAGC TCACCATTCT CAAACCTGAT AACTCCGCCA
AATATCGATG AGATTGCATC TGTTACAAAT CCGTTAGATA TTTTTATGGG TATCTCTTTG
ATGAAAACTC TAGATAAAGA TTTCAGTGAT TATGTTCTAA AAAAAGATGA ACTAAATAAG
CTAATAATAC TATTAAGAGC AGAAATAAAT ATATACACTC AAATAGAAGC GATAGATACA
GAGCATAAAT ATAAAGAACA GCTAGATTTT AAACTAAAAC AGTTAGAGAG ATTTGAATCA
GCACTAGACA CTATGAATGT TACAGTAGAT GTTTATGAAA AAAGATTAGA TATCATAACG
GTAAATATAA ATAAAGATAT AGAAGTTCAA ATTTTAAAAC TTATTAAAAT AGCTGTAACT
ATTTTTGTTG TTTTCTTGAT ATTTTTCTTA TTAAAACTTA TCATTAAAAA ATATATTAAA
GATAATGAAC GCTTCTATAT GGCAAATAAA ATTATCACTT TTATCAACTT TACGCTCATT
ATTTTAATTC TATTTTTTAG TTACATTGAA AATGCAAACT ATCTTGTTAC TATTTTGGGG
TTTGCTTCTG CTGGTATTGC AATTGCTATG AAAGATTGGT TTATGAGCAT ACTTGGCTGG
CTTGTAATTG TCTTTGGCGG AAGTGTACAT GTAGGAGATA GAATCCGTGT TGATATGGAT
GGAATGCAGT ATGTTGGTGA TGTTATGGAT ATCTCACTTC TTCGTATGAC TATACTTGAA
GATATAACAC TCACCGCAGT TACTCAAAAT AGAAGAGCTG GACGAATTAT TTTCATACCA
AATAACTATA TCTTTACAAG AATGATAGCA AACTACACAC ACAGTTCACT AAAGACCGTT
TGGGATGGAG TTAAGATAAC TATAACCTTT GATTCTAACC ACAAAAAAGC GATGCATTTA
GCAAAAGAGA TAACTAAGAA ATTCTCAAAA GGCTACACAG ACATCACAAG AAAACAGCTC
AACAAACTAA GAAGCAACTA TAGCCTTAAA AATACAAATG TTGAGCCTAG AATTTTCTCT
TTCATTGAGC CAAATGGTAT CTGTATAGAT GCTTGGTATT TAACAAATGC TTATGGAACT
CTTACACTAA GAAGTGTCAT CTCAACAGAG ATAATAGACG CTTTTTTAGC AGAAGATGAT
ATAACTATTG CGTATCCTAC ACAGATGCTT CATATGGAGG CATCTGCTAA GAGAAAGCCT
CCATTTGAGA GCGATGAAGT AGTATAA
 
Protein sequence
MSKIFFYLLI ASSLLFSDIL KSEVKPTQEE LERIKIEQER AVKDKISQLV SELKVIEERI 
SKRDSVWIKS YASYLTSLEV RESLDKIVER INYLQKKRDK SLSEADELNA LLGREKILTS
QIEKLKRKDS SPFSNLITPP NIDEIASVTN PLDIFMGISL MKTLDKDFSD YVLKKDELNK
LIILLRAEIN IYTQIEAIDT EHKYKEQLDF KLKQLERFES ALDTMNVTVD VYEKRLDIIT
VNINKDIEVQ ILKLIKIAVT IFVVFLIFFL LKLIIKKYIK DNERFYMANK IITFINFTLI
ILILFFSYIE NANYLVTILG FASAGIAIAM KDWFMSILGW LVIVFGGSVH VGDRIRVDMD
GMQYVGDVMD ISLLRMTILE DITLTAVTQN RRAGRIIFIP NNYIFTRMIA NYTHSSLKTV
WDGVKITITF DSNHKKAMHL AKEITKKFSK GYTDITRKQL NKLRSNYSLK NTNVEPRIFS
FIEPNGICID AWYLTNAYGT LTLRSVISTE IIDAFLAEDD ITIAYPTQML HMEASAKRKP
PFESDEVV