Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1021 |
Symbol | |
ID | 3764001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 1074900 |
End bp | 1076546 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_393534 |
Protein GI | 78777219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.69997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA TATTTTTTTA TCTACTTATC GCCTCATCAC TACTCTTTAG CGATATTTTA AAGAGTGAGG TAAAGCCTAC TCAAGAAGAG CTAGAACGTA TAAAAATAGA GCAAGAGAGA GCTGTAAAAG ATAAAATTTC TCAACTTGTC TCAGAGTTAA AAGTTATTGA AGAGAGGATT TCTAAAAGAG ATAGTGTTTG GATAAAGAGT TATGCCTCTT ATCTTACCTC TTTGGAAGTT CGAGAGAGTC TTGATAAAAT TGTGGAGAGA ATTAACTATC TTCAAAAAAA GAGAGATAAA TCACTTAGTG AAGCAGATGA GCTAAATGCG CTTCTTGGTC GTGAGAAGAT TTTAACATCA CAAATTGAGA AATTAAAAAG AAAAGATAGC TCACCATTCT CAAACCTGAT AACTCCGCCA AATATCGATG AGATTGCATC TGTTACAAAT CCGTTAGATA TTTTTATGGG TATCTCTTTG ATGAAAACTC TAGATAAAGA TTTCAGTGAT TATGTTCTAA AAAAAGATGA ACTAAATAAG CTAATAATAC TATTAAGAGC AGAAATAAAT ATATACACTC AAATAGAAGC GATAGATACA GAGCATAAAT ATAAAGAACA GCTAGATTTT AAACTAAAAC AGTTAGAGAG ATTTGAATCA GCACTAGACA CTATGAATGT TACAGTAGAT GTTTATGAAA AAAGATTAGA TATCATAACG GTAAATATAA ATAAAGATAT AGAAGTTCAA ATTTTAAAAC TTATTAAAAT AGCTGTAACT ATTTTTGTTG TTTTCTTGAT ATTTTTCTTA TTAAAACTTA TCATTAAAAA ATATATTAAA GATAATGAAC GCTTCTATAT GGCAAATAAA ATTATCACTT TTATCAACTT TACGCTCATT ATTTTAATTC TATTTTTTAG TTACATTGAA AATGCAAACT ATCTTGTTAC TATTTTGGGG TTTGCTTCTG CTGGTATTGC AATTGCTATG AAAGATTGGT TTATGAGCAT ACTTGGCTGG CTTGTAATTG TCTTTGGCGG AAGTGTACAT GTAGGAGATA GAATCCGTGT TGATATGGAT GGAATGCAGT ATGTTGGTGA TGTTATGGAT ATCTCACTTC TTCGTATGAC TATACTTGAA GATATAACAC TCACCGCAGT TACTCAAAAT AGAAGAGCTG GACGAATTAT TTTCATACCA AATAACTATA TCTTTACAAG AATGATAGCA AACTACACAC ACAGTTCACT AAAGACCGTT TGGGATGGAG TTAAGATAAC TATAACCTTT GATTCTAACC ACAAAAAAGC GATGCATTTA GCAAAAGAGA TAACTAAGAA ATTCTCAAAA GGCTACACAG ACATCACAAG AAAACAGCTC AACAAACTAA GAAGCAACTA TAGCCTTAAA AATACAAATG TTGAGCCTAG AATTTTCTCT TTCATTGAGC CAAATGGTAT CTGTATAGAT GCTTGGTATT TAACAAATGC TTATGGAACT CTTACACTAA GAAGTGTCAT CTCAACAGAG ATAATAGACG CTTTTTTAGC AGAAGATGAT ATAACTATTG CGTATCCTAC ACAGATGCTT CATATGGAGG CATCTGCTAA GAGAAAGCCT CCATTTGAGA GCGATGAAGT AGTATAA
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Protein sequence | MSKIFFYLLI ASSLLFSDIL KSEVKPTQEE LERIKIEQER AVKDKISQLV SELKVIEERI SKRDSVWIKS YASYLTSLEV RESLDKIVER INYLQKKRDK SLSEADELNA LLGREKILTS QIEKLKRKDS SPFSNLITPP NIDEIASVTN PLDIFMGISL MKTLDKDFSD YVLKKDELNK LIILLRAEIN IYTQIEAIDT EHKYKEQLDF KLKQLERFES ALDTMNVTVD VYEKRLDIIT VNINKDIEVQ ILKLIKIAVT IFVVFLIFFL LKLIIKKYIK DNERFYMANK IITFINFTLI ILILFFSYIE NANYLVTILG FASAGIAIAM KDWFMSILGW LVIVFGGSVH VGDRIRVDMD GMQYVGDVMD ISLLRMTILE DITLTAVTQN RRAGRIIFIP NNYIFTRMIA NYTHSSLKTV WDGVKITITF DSNHKKAMHL AKEITKKFSK GYTDITRKQL NKLRSNYSLK NTNVEPRIFS FIEPNGICID AWYLTNAYGT LTLRSVISTE IIDAFLAEDD ITIAYPTQML HMEASAKRKP PFESDEVV
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