Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0926 |
Symbol | |
ID | 3764042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 960861 |
End bp | 961733 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | ABC transporter-related protein |
Protein accession | YP_393439 |
Protein GI | 78777124 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00057204 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGA TAAATATAAT AAAGCCCTTA AATACAGCAG ATGGAGAGAT AAATCTAGCA GTAGATAAAA AAATAGAAGA TGGTGAATTT TTAACTCTTT TTGGAAAAAG TGGAAGCGGA AAAACAACAC TTTTGCGAAT AATTGCAGGT CTAGAAGTTC CAGAGAGTGG CTACATAAAA GTTGATAATG AAGTTTGGTT TGATAGTAAG AGAGGCATAA ACATACCTCC GCAGAGACGA AATGTAGGCT TTGTTTTTCA AGACTACGCA CTATTTCCAA ATATGAGTGT GGAGGATAAT CTAAAATTTG CTCTTCAAGA TAAAAATAAG TTTAAAAAAG TTGATGATAT CTTAAAAATA ATGGAGATAC AAAATCTCTC TAAGATGAAA CCACAGCACT TAAGCGGTGG ACAAAAACAG AGAGTAGCAG TTGCTAGAGC ACTTATGAGA GAGCCTAAAA TACTTCTTCT TGATGAACCA TTATCAGCGC TTGATAGCAC AATGAGACAA AAACTCCAAG ATGAACTTTT TTTCATACAC CAAAAATTTG GCATTATCTC TTTACTTGTC AGCCATGATA TAGGTGAGAT TTTTAGGCTC TCAAGTAGAG TTTTTAAAAT CTCAAGTGGA GAGATAACCC ATGATGGCTC GCCGAGTGAG GTATTTGCAA ATCAAAATAT TAGTGGAAAG TTTAAAATAC TCGGCGAGGT TTTAAGCATC AAAAAAAGTG ATATTTTATA TATAGTAGAA GTCTTGGCAC ACAATGAAAT CATCAAAGTA ACAGCTATAA AAGATGAGAT AAAAGAGCTC TTAGTAGGTG ATAAAATACT CCTCTCAAGC AAAGCATTTA ACCCAATTTT AACAAAAATA TAA
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Protein sequence | MIEINIIKPL NTADGEINLA VDKKIEDGEF LTLFGKSGSG KTTLLRIIAG LEVPESGYIK VDNEVWFDSK RGINIPPQRR NVGFVFQDYA LFPNMSVEDN LKFALQDKNK FKKVDDILKI MEIQNLSKMK PQHLSGGQKQ RVAVARALMR EPKILLLDEP LSALDSTMRQ KLQDELFFIH QKFGIISLLV SHDIGEIFRL SSRVFKISSG EITHDGSPSE VFANQNISGK FKILGEVLSI KKSDILYIVE VLAHNEIIKV TAIKDEIKEL LVGDKILLSS KAFNPILTKI
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