Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0878 |
Symbol | |
ID | 3764091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 908303 |
End bp | 909094 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | secretion protein HlyD |
Protein accession | YP_393391 |
Protein GI | 78777076 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0949246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAAAA TAGTAACACT TTTAGTGATG CTAAGTGCCA TATTAGCAGC AGAGGGAATT ACTCTCTCTG GCACAGTTAT AAGTGACAAC AGGAAGATGA TAACAAGCCG TTTTATGGGC TTTGTAACAG ATGTTAAAGT ATCTGAGGGT GACAGCGTAA AAAAAGGAGA CCTTCTATAT ACGATTGACT CAAAAGAGAT AGATTCTGCT CTTATTCAAG TAGAACTTGG TATCTCTCAA GCACAACTTA GCCTTCAAAT GTATCAAAAC CAATATACAA ACGTAAAATT GAATTTAGAT AGACATAGAA GACTCCTTGA AAAAGATATG GTTTCAAAGT TTGAAGTTGA AAACTTAGCT CTTGCTGAAC AAAATCTTGC AAATATGATA ATTATTGCTA AAAAACAGGT TATTCAAGCA GAAGCACAAT TAGCAGAAGT TAAAAATCAG TATCGCTACT TAAACATAAC AGCGCCAAAC AATGGTGTAA TAGTTAGCAA AAACATAAAA GTTGGAGAGA TGGCGATGCC AGGAATGCCA GCTTTAGAGC TATCTGATTT GAGTGATTTA AAAATATCAG CTGAAATATC AGAGGACAAC TTAAAACTTA TACAAGAGGG GAAAAAAGTA GTCGTAAATA TAGCGTCTCA AAACATTCAA ACAGTTGGAG TAGTAAGCGC AATAATCCCT AGCTCAAACC CAATGACGCA CTCATTTAAG ATAAAAATTT CATTTAAAAA TGTGTACAAC TCTATCTATC CAGGTATGTA TGCAACTGTT GTAATTGAGT AG
|
Protein sequence | MRKIVTLLVM LSAILAAEGI TLSGTVISDN RKMITSRFMG FVTDVKVSEG DSVKKGDLLY TIDSKEIDSA LIQVELGISQ AQLSLQMYQN QYTNVKLNLD RHRRLLEKDM VSKFEVENLA LAEQNLANMI IIAKKQVIQA EAQLAEVKNQ YRYLNITAPN NGVIVSKNIK VGEMAMPGMP ALELSDLSDL KISAEISEDN LKLIQEGKKV VVNIASQNIQ TVGVVSAIIP SSNPMTHSFK IKISFKNVYN SIYPGMYATV VIE
|
| |