| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0526 |
|---|
| Symbol | trmE |
|---|
| ID | 3764481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 525845 |
|---|
| End bp | 527185 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | tRNA modification GTPase TrmE |
|---|
| Protein accession | YP_393041 |
|---|
| Protein GI | 78776726 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG ATACAATAAG TGCCATTGCA ACCGCAAATG GCATAGGCTC CATAGCAATT
ATCCGCATAA GCGGAGATAG AGCTTTGGAG ATAGCTTCAA AAATTACCCA CAAAGATAAT
TTTACCCCAC GATACGCATC ATTGTCCAAC ATATATGACT TTCATGGCGA GTTAATAGAT
GAAGCAATAG TTATTTACTT TAAAGCACCG TTTTCTTTTA CTGCGGAGGA TGTTGTTGAG
ATTCAGTGTC ATGGCGGGTT TATCGTCGCT CAGAGTATTT TAAAGACGAC ACTTTTGCAT
GGTGCTAGAC TTGCAACTGC TGGGGAGTTT TCAAAACGTG CTTTTTTTAA TGGTCGAATC
GATTTAAGCA AGGCTGAAGC TATTGCACAG CTAATTGAGG CAAAAAGTGA AGATGCTGCA
AAAATTTTAG CACAGCAGAT GAAGGGTTCA CTCAAAGAGT ATGTGGAAAA AATCAGAGAT
GATCTTATCC ATATACTTGC TTATTCAGAG GTTAGTATTG ATTATGCAGA AGAGGATTTG
CCAGAGGATT TGGTTATGCA GATTCAAGCA AAACTCAAAG AGTTGAAAAC TTCTCTCAAC
AAAACACTTC AGGCAAGCAA GGCTAGAGAA GGGCTAATGC AGGGCTTTAA GGTGGCAATT
ATTGGGAAAC CAAATGTTGG GAAAAGTTCA CTTCTTAACG CACTTCTTAA CTATAACCGT
GCAATAGTTA GTGATATAGC TGGGACTACA AGAGATACTA TAGAAGAGCA GGTTAAAATC
GGTACGCACC TTATCCGCAT AGTCGATACT GCGGGTATAA GAGAAGCTAG TGATGAGATA
GAGAGAATAG GGATAGAGCG CTCATTAGAA GCAATAAATG AGAGTGATAT AGTCATAGCA
CTCTTTGATG CTTCTAGAGT TGCCGATTAT GAAGATGAGC AGATTTTATC GCTAATAGAG
TCAAAGGCAG GAAGCAAAAA TGTTCTACAT GTTAAAAATA AGATAGATTT AGAAGAGAAA
TTTTATAGAT CTTCTTTAGA GTTTGATATA GAGATAAACT CTAAGGAGGG CGTTGAAGAG
CTGATTTTAG CGCTAGAGAA TATTATGAAT CAAGCAAACA CTTCAGATGA GATGATGCTG
ATTTCTCAAA GACAGATAGG TGCAGTTCAA AACACTCTTA ACTACATAGA TGAGGCATTT
GAGCCACTGC AGGAACAAGA ACTTGAGATA TTCTCTTTTA ATCTAAATGA AGCAATAAAA
GAGATAGCTT CAATCACAAG ACCATTTGAA AATGATGAGA TGTTAGATAA GATGTTTGGT
TCTTTTTGTC TAGGAAAATA G
|
|---|
| Protein sequence | MSEDTISAIA TANGIGSIAI IRISGDRALE IASKITHKDN FTPRYASLSN IYDFHGELID
EAIVIYFKAP FSFTAEDVVE IQCHGGFIVA QSILKTTLLH GARLATAGEF SKRAFFNGRI
DLSKAEAIAQ LIEAKSEDAA KILAQQMKGS LKEYVEKIRD DLIHILAYSE VSIDYAEEDL
PEDLVMQIQA KLKELKTSLN KTLQASKARE GLMQGFKVAI IGKPNVGKSS LLNALLNYNR
AIVSDIAGTT RDTIEEQVKI GTHLIRIVDT AGIREASDEI ERIGIERSLE AINESDIVIA
LFDASRVADY EDEQILSLIE SKAGSKNVLH VKNKIDLEEK FYRSSLEFDI EINSKEGVEE
LILALENIMN QANTSDEMML ISQRQIGAVQ NTLNYIDEAF EPLQEQELEI FSFNLNEAIK
EIASITRPFE NDEMLDKMFG SFCLGK
|
|---|
| |