Gene Tcr_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2155 
Symbol 
ID3761320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp2378899 
End bp2379603 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content43% 
IMG OID637786904 
Producthypothetical protein 
Protein accessionYP_392417 
Protein GI78486492 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCACA GCGAAAGAGC GGCTCATCCA GATATTCATG CCTACATTGA TGGTGAATTA 
ACTGGAGCAG AGCGCGCCGA GTTTGAAAGG GGCTTGCAGC AAGATAAAAA ACTGCAGGAT 
GAAGTGTGCG AGTTAAGAAA AATTAAGCAA CAAATGCTGG AGCATTATCA AAAAATTCCA 
GTGCCGAAGA TTCCCAAGCC ACAGTCTAGA TCATTTAATT CAAGTTGGGC TGTAGCCGCC 
TCGTTTGTGG CGGCTTTCGG GCTCGGTTTT TTTGTCTCGT CAGATTCGTT ATTAAGTTCA 
CCGTATGAGC CTAAAACCCT ATCGGTAGCA CAAAATTCAA CACAAAAGTT ACTATTGCAT 
ATCGATTCTA ACCAACCTGA AAGAACGAAG GCGTTACTGC AGAAGACCAG TGCGTTATTG 
CAGGCTCAGT CGACCGGTTC GAGGATGCCT AAAATGCAGA TTGAAATTGT GGCAAATGAT 
CATGGCATTG AACTTTTTGA AGAAGGTAAC CCAAGCCGTG AAGCCATTGT GCAGTTATTA 
GCCCAGTACG ATAATTTGAA GTTGATTGCC TGTCAAAGAG CGTTGAAACG TCGTGCGGAT 
GAAGGGAAGC CTTTAGCAGT GATTAAAGGT GTTGAAACCG ATAAACCTGC TCTTGATGAA 
ATTGTGAATA AAATGCAAAA AGGTTGGGGG TACTACAAGT TTTAA
 
Protein sequence
MNHSERAAHP DIHAYIDGEL TGAERAEFER GLQQDKKLQD EVCELRKIKQ QMLEHYQKIP 
VPKIPKPQSR SFNSSWAVAA SFVAAFGLGF FVSSDSLLSS PYEPKTLSVA QNSTQKLLLH 
IDSNQPERTK ALLQKTSALL QAQSTGSRMP KMQIEIVAND HGIELFEEGN PSREAIVQLL 
AQYDNLKLIA CQRALKRRAD EGKPLAVIKG VETDKPALDE IVNKMQKGWG YYKF