| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1994 |
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| Symbol | |
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| ID | 3762306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2192551 |
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| End bp | 2194647 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786743 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_392258 |
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| Protein GI | 78486333 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTATT CAAAAATAGG GTTAGCCGTT TTGGCCGGAA TGTATGCGTC GGTCTCTTTT
TCAGAGACCT CTTTAGACGC CATTACGGTC ACAGCGACCA AAGAAGAACG TAAAGCATTG
GATGTGTCCC AAAGCGTGGA CGTTGCCGAC CGGCAAGCCA TTGAAGATAA AAATGCACGC
AACATTAATG ATGTGATTAA GACCATGCCG GGGGTGATCG CCGTGAGTAA AAACGGCGGA
TATGATTCCC GTTTGATTAT TCGAGGGGCC GGTTTAAAGG CACGTTATGG TGTGCGTGAA
ATCATGGTTA TGCGCGACGG TGTTCCGATG ACGGACCCAG ACAGCTTTAC ACGGTTCGAT
TTTATTGACA TCGATGATAT GGAGTCGGTC GAAGTGTTTA AAGGCCCGGG TTCCATTGAA
GCCGCTAATG CCAGTGGCGG GGTTATCTCA GTCCGATCCA TCTCCGTATT TGATGATTCG
AAAGATTATT TTAAAGTGGG GGCGGGTTCT GAAACCAGTC GTAATGCGGC GATTCATAAA
ACTTGGCAAG CGGGCGATGA TGATAATTTT TCCGTCCAAT TGTCTCGCCG CCAAACCGAT
AATAACTGGC GCGAACACAA CCAGTTTGAT ACCACTCAGT TTTCAGTGAA GCAAGGACAC
TTTTTTGCGG ATGACAGTAC TTTAGAAACC GAAATCAGTT ATCAAAAGTC TAATTTGGAG
TTGCCGAGTT CGTTGAATGA AGATGGGTTT GTGTACTACA AAGACACGGG CAAAACCTTA
AATGACAAAG CGAATACCGG GTCGGTCTGG TCGCAAAGTG CGCGTGACAG TGAAACATTG
TTTTTCAACA CACGCTATAA AACCGAATTA GGCAACGGCA TTAAATTTAA TCCACAGTTT
TATGTCAACA AGTGGGAGCA CTTTCATCCA GTCACTGGGT TTATCAACGA TTCAAAAAAC
AATTATGTGC TTGGAACCGA TTTAATGTTC AGTCGTCAAC ACTTCGCCTT TGGCAAACCC
GCTAATCAAG TGTTTGGGGT GACGATGCGA GCCGATATTC GTGAGGATGG TAAAAAGTAC
AAATACCGCG ATATCACCAC CATTCCATCG GGGCGAATTA CTCAGGTTTC CTCTGATGAA
AAAGGGGATT TAGCGCAAGT TGAAGATGCG AATAGCCAAT TAAGTGGCGC TTATTTCCAG
CAAACGATTT CTTTAACCCC TGACTGGACA GTGGACGCGG GATTGCGTTA TGACCACTTG
AATATGGATA TTTCCGGTCA ACAATATTAT GCCTTCGATT ATGCCGCGGG AGGCTATAAA
GTCGGTGAGG GAGCCTATTC GTATAAGGCC AGTTATGACT TGTTTGCACC GAAAGTGTCT
GCCAACTATG CATTAAATCA ACAAAGCCGA CTGTATGGAA CCGTCAGTGG TGCACAGCAG
GCACCAACAG ACAGTGAAGT CAGTGCCAAT TACGCTTATG GTCAAGCGGA AAAACTTAAA
GCTTCAACGG CACTTCAATA TGAGCTGGGT TATAAGTTGA ATGCAACCCG GTTGGCAACG
ACGGTTGCGA TTTATCAGAT TGATTTAACC GATGAAATCG TTGGCGTGAA AGATGGCTGG
ACAACCTATT ACGTCAATGC CGGAAAAACT CAAAAACGTG GTGCGGAAGT GAGTGCTTCC
TATCGTGTAA CGCCTTCGGT CACGATGGGG GGAAGTGCCG CTTGGCAGAA TTATGAATAT
TTAGAGTATG CGGACAGTGG CTACGATTAT TCCGGTAATA AAGTGCGTTT TATTCCCGAG
CAACAATATA ACGTCTTTGT CGGGTATAAA TCGAATGGTT GGCAGGCACG AATGGAAGCC
TTAGGGTTTG GAAGTTATTA CATTGACGAT GCCAATACTG AAAAATATGA CGGTTATCAG
ATGGTGTCGA ATATGATGCT GGGTTATGAG ATGAAACAGC ATAAATTACA GTTAAACGTA
AACAATGTCT TTGACATGCG TTATGCGGAA GAAGTGTCGA AAGATACACG CGGAACCTAT
GCTTACACAC CTGGTGCACC GAGAAACATC CAGTTAAATT ATCGTTATCA ACTCTAA
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| Protein sequence | MNYSKIGLAV LAGMYASVSF SETSLDAITV TATKEERKAL DVSQSVDVAD RQAIEDKNAR
NINDVIKTMP GVIAVSKNGG YDSRLIIRGA GLKARYGVRE IMVMRDGVPM TDPDSFTRFD
FIDIDDMESV EVFKGPGSIE AANASGGVIS VRSISVFDDS KDYFKVGAGS ETSRNAAIHK
TWQAGDDDNF SVQLSRRQTD NNWREHNQFD TTQFSVKQGH FFADDSTLET EISYQKSNLE
LPSSLNEDGF VYYKDTGKTL NDKANTGSVW SQSARDSETL FFNTRYKTEL GNGIKFNPQF
YVNKWEHFHP VTGFINDSKN NYVLGTDLMF SRQHFAFGKP ANQVFGVTMR ADIREDGKKY
KYRDITTIPS GRITQVSSDE KGDLAQVEDA NSQLSGAYFQ QTISLTPDWT VDAGLRYDHL
NMDISGQQYY AFDYAAGGYK VGEGAYSYKA SYDLFAPKVS ANYALNQQSR LYGTVSGAQQ
APTDSEVSAN YAYGQAEKLK ASTALQYELG YKLNATRLAT TVAIYQIDLT DEIVGVKDGW
TTYYVNAGKT QKRGAEVSAS YRVTPSVTMG GSAAWQNYEY LEYADSGYDY SGNKVRFIPE
QQYNVFVGYK SNGWQARMEA LGFGSYYIDD ANTEKYDGYQ MVSNMMLGYE MKQHKLQLNV
NNVFDMRYAE EVSKDTRGTY AYTPGAPRNI QLNYRYQL
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