Gene Tcr_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1993 
Symbol 
ID3762305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2191182 
End bp2192540 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content45% 
IMG OID637786742 
Producthypothetical protein 
Protein accessionYP_392257 
Protein GI78486332 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATAA ATAATTTATT ACGTTGGCCC TTATTGGGGA TGCTTTTGCG CCATCCATTG 
AGTTTGAACA GTCTAAGGGT GGCGGTTTTA GCCTTGTTTG CCAGTGCGGT TTATTTTGGC
ATCACATATC CAACGGAGGC TGAAAACCCT TATACGGTTG CCATTTTTTG GTCTCTGTTC
TGGCCGTTCT TTTTAGTGGT GTCAATGGTG ACGTTTGGAC CACTTTTCTG TACGGTCTGT
CCGCATAGTT TTATTGGGAA ATACCTCAAT AAACTCGGTC CTCAGAAATT GATGCCAAAT
TGGATGCGGC ATCGTGGTTG GGGGCTTGGG CTGTTGATAT TGAGTTATTG GGTGCCAGTG
TATGTTTTTC CGGACTTCCT GAAAGTGCCT TATGTCAGTG CGATGTATTT CTTGGTGCTG
ACATTGATTG CTTTGGCGGG GTTCTATTTA TATCGCAATA TGGACTATTG TCGCTATGGC
TGCCCGATTG GCTCGGTGAT TAAATCCTAT GGAAAGGTCA GTTTTGCTCG ATTGGAAACG
CAGTCGTCTG ATTGTCAGAC GTGTCGAAGT TTCGATTGTG TGAAAGCCTG CCAGTGGAAC
CTTCGTCCCT ATTTATTTGA AAAAAAGAAT AATATGCAAG ATTGCACCCT GTGTATGGAT
TGCGCACAGG CGTGTGATTC GGTTCAGTGG AAGGTGTCTT CTTTTGCCAA ACAAGTGATT
CAGCCTGTAA AACAATTGGA TCGTATGACC ATTTGGGTCT TTATTACTTT GTTGGCCGTA
ATCACCATCG CTATGCGGTT TCATCATGCA TTAGGTCACA GTCCGATTAA AGAAAATCTA
CCTTGGTTCC AAGTTGGAAG CTGGTTGGAA ATGGTGATGC CAGTGATTCC GGTGATCGAT
TGGGTCGGGT TGGTGGCGCT GTTGATGGCG GTCGTCATGA CCTTCAGTTT AACGTTGGGG
GGGATGTGGT TGACCAGTCG ATTAACCCAA ATTGATTTCT GGAAAGTGTT TGAAACTGCC
GGGTTGGCTT TTGGGTCACT GATGTTAATC GGTGCGCTCA GTCATATCGG GAGTTTTTTC
TTCATTCATT ACGCGCCGGA TTTGGGCAAT GCGTATTATT GGTTGATGAA TTCCGATTCG
GTTATGAAGC CACTGGCAAG TCACCGAGAT GGCTGGATTC ATTTATTTAC CCTTTTCAAT
TTCTTGGCGG TGATTGTGAG CAGTGTCATT TTGTACAAGA AGTTAAACCA GCTTAATCTG
TCGGGTTCTC GATTGGGGGT GGCTTACCTT TCATCCGGCT TGATAATATG GGTGTATTTA
GGGTTGGTGA TTTTAACGCT TTGGGCTAGA GCACATTAA
 
Protein sequence
MQINNLLRWP LLGMLLRHPL SLNSLRVAVL ALFASAVYFG ITYPTEAENP YTVAIFWSLF 
WPFFLVVSMV TFGPLFCTVC PHSFIGKYLN KLGPQKLMPN WMRHRGWGLG LLILSYWVPV
YVFPDFLKVP YVSAMYFLVL TLIALAGFYL YRNMDYCRYG CPIGSVIKSY GKVSFARLET
QSSDCQTCRS FDCVKACQWN LRPYLFEKKN NMQDCTLCMD CAQACDSVQW KVSSFAKQVI
QPVKQLDRMT IWVFITLLAV ITIAMRFHHA LGHSPIKENL PWFQVGSWLE MVMPVIPVID
WVGLVALLMA VVMTFSLTLG GMWLTSRLTQ IDFWKVFETA GLAFGSLMLI GALSHIGSFF
FIHYAPDLGN AYYWLMNSDS VMKPLASHRD GWIHLFTLFN FLAVIVSSVI LYKKLNQLNL
SGSRLGVAYL SSGLIIWVYL GLVILTLWAR AH