Gene Tcr_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1990 
Symbol 
ID3762302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2188794 
End bp2189624 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content49% 
IMG OID637786739 
Producthypothetical protein 
Protein accessionYP_392254 
Protein GI78486329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.287455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAT CCTCATTTCC CATCGTTATT GACGACCATC TTTTGCCTGA CAAAGCGCAC 
GCTTTAGCGC AGCAATTAAA CCTTCCTTTG ATTTCCGCAA CCGAGGCCGA AAAAAGTGCT
CCATTGATGA AACTTGGATG GTGGCAAGAC GGTAAAAAAT CAGGCGATCA TACGAATGAA
ATAGACTATA AACTGGCGTT ATTTCCGCCT AGTACCGGAC CGGTGTGTAT TGATTTTGTC
AGCGGCAAGA AAAATCATCG CCGTCAATTT GGTGGTGGAA AAGGTCAGCC CTTAGCCCGT
GCCGTACTGG CGGCCGAACA CCCCACCATC ATAGACGCCA CGGCAGGCAT GGGAGGAGAC
GCTTTCGTAT TTGCCAGCCT TGGTTGCCAG GTCACTATGA TTGAACGCTC GCCTATTATT
GCCGCGCTCT TAAGCGATGC CTTAAATCGC GCTCAACAGA CTGGCGTTGC GGAAGACATT
CAAGAAATTG TCAAACGACT CCGCTTAATC AATGACGATG CCACCCAATA TTTAACGACT
CAAGCACCCA TCTGCGATGT TATTTATCTT GATCCAATGT ACCCGGAAAA GAAAAAAACC
GCCGCGACCA AAAAGGAAAT GCAAGCCTTG CAACACTTGG TGGGGCCTGA CATCGATAGT
GAGACTCTTC TGGCGGCAGC CCTGCATGTT GCGCAAAAAA GGGTCGTCGT CAAACGTCCC
AAAAACGCCC CCGCCTTGAC GGGAATACAA CCCAACGCGT CCATTCAAAG CCCCAATACA
CGTTACGACA TTTATGCCAT CAAAGCGCTC AAGGCGGCAG GCAAACTTTA A
 
Protein sequence
MQTSSFPIVI DDHLLPDKAH ALAQQLNLPL ISATEAEKSA PLMKLGWWQD GKKSGDHTNE 
IDYKLALFPP STGPVCIDFV SGKKNHRRQF GGGKGQPLAR AVLAAEHPTI IDATAGMGGD
AFVFASLGCQ VTMIERSPII AALLSDALNR AQQTGVAEDI QEIVKRLRLI NDDATQYLTT
QAPICDVIYL DPMYPEKKKT AATKKEMQAL QHLVGPDIDS ETLLAAALHV AQKRVVVKRP
KNAPALTGIQ PNASIQSPNT RYDIYAIKAL KAAGKL