| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1971 |
|---|
| Symbol | |
|---|
| ID | 3761171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2167360 |
|---|
| End bp | 2167680 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637786720 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_392235 |
|---|
| Protein GI | 78486310 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.180727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCTG AAAAAAGCAT TTTTAGCAAA ATCATCGATC GTGAAATCCC GTCAGAAATT
GTTTACGAAG ATGAAAAGTG CATCGTCATT AACGACATCA ATCCTAAAGC GAGAATACAC
CTACTGGTGA TTCCCAAAAA ACCGATTGCG ACTTTGTTTG ACTTAGCACC TGAAGATAAA
GATTTAATGG GCCACATGAT GTTATTACTA CCCCAACTGG CTCAGTCTCA AGGTCTGGAT
GGCTTTAAAA CGCAAATCCA TACCGGAGAA TCTGGTGGGC AGGAAGTTTT CCATATCCAC
ATTCACCTGT TAGGAAATTA A
|
|---|
| Protein sequence | MTPEKSIFSK IIDREIPSEI VYEDEKCIVI NDINPKARIH LLVIPKKPIA TLFDLAPEDK
DLMGHMMLLL PQLAQSQGLD GFKTQIHTGE SGGQEVFHIH IHLLGN
|
|---|
| |