Gene Tcr_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1936 
Symbol 
ID3761130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2122669 
End bp2123136 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content42% 
IMG OID637786679 
Producthypothetical protein 
Protein accessionYP_392200 
Protein GI78486275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.191079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTTTTGACAG TATCATGACC TTAAGCTATT CATTAGCCGC CTTAGTCTTA 
TTTGGCATGG CGTTTACCAC CATCGGCTGG TCGGTTTATG AAGTCTTCGC TGAAATCGGT
AATGAAGATC ATATCAGTGG CGAGTTTGTC TCAATTATGC TGCAATCGGT AGGGGCCATT
GTTATTTCTG TGGCCATCAT CGATGTTGCT AAATACATGG TTGAAGAAGA GGTCTTCAGA
AATAAAGAAC TCCGCTCCCC TAGAGAGGCT CGACAGACCA TCACGAAGGT GATTGTGATT
TTGTCGATTG CCGTCGGTAT TGAAGGGTTA ATTTTTATCT TTAAAGCAGG TAGCCGAGAT
ATTACCTTGT TACTTTACCC TACTTCAATG ATCATAGCTG CTGTGGTATT GATTGTCGGC
TTAGGAGTTT ATCAAAAGCT CAGTTCCTCA GTCGAAAAGA AGCCGTAA
 
Protein sequence
MKKFFDSIMT LSYSLAALVL FGMAFTTIGW SVYEVFAEIG NEDHISGEFV SIMLQSVGAI 
VISVAIIDVA KYMVEEEVFR NKELRSPREA RQTITKVIVI LSIAVGIEGL IFIFKAGSRD
ITLLLYPTSM IIAAVVLIVG LGVYQKLSSS VEKKP