Gene Tcr_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1910 
Symbol 
ID3761104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2092025 
End bp2093101 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content46% 
IMG OID637786653 
Producthypothetical protein 
Protein accessionYP_392174 
Protein GI78486249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0294778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTGT CTCCATTAGC TTACACAACC TTTTTCGTTT TTCCATTCAT TGTTTCACCC 
GTTCAAGCGT CCAACCAATT AGCCGGTGGG GTTTGGTTTA ACTATAACCA GTCGTTGCAT
TCCGGTGCAA ATGAGCCGAA TAATGGCACC ATCGGTGATG AAGCGTTGGT GTTGTATGCC
GATGGTCAAG CAGATAAAGG GCAAGGCAAC TGGTCTTATT CCATGGAGTG GCGTATGGGG
CCGGGTAGTT TTACCGATCC AGCAAATAAC TCAACCGGTG ATCAAGCCGG CATGCATAAA
GCCTGGGTGG GGTTTGATAT TAATGAATCA TACAAGTTGG TTATCGGGAA AAGCCAAGTG
CCATTTGGCT GGAAAACCTA TAACTTCTGG CCGGGTGATA TGTTACAAGG TGGCTACGGC
GACCAAATGG ATGTCGGGCT TAAGTTGCAA GGCGAAGCCT CGAATCTTCA TTATGATGTG
GCTTATTTTC ACCAGGATGA CTGGGGAAAG ACCAGTACCG ATACCATGGA TGACAATCGA
CATTGGGGGG CTTCAACCAC CTATCGAAAA GTTCAAACGT GGGTTGGAAA TGTCGGTTTC
GATTTGACCC CGCACCAAAC GGTAGGGGTG TCATTGCAAA CCGGCCAACT TCAAGATTTT
ACGACCGCAG AAGACAAAGT CGATGGCGAT CATTCTGCTG CCGTGGTTTA TTATAAAGGC
ACGTTCGGTA ACACCTTTTT AAAGGGTGAA ATGATCCAAA CGCAACGAAA CTTACCTGAA
AATTATGCGA TTAATAATGG GTTAGAACGC AAGATTGAAA ATACGCGTTA TGCCTTTGAA
GTCGGGCGTT CCAGTGGGAA TTGGACGTAT TATTTGGATG CCTCGTGGGC AGACCCGAAA
ACCAAAGGCA ATGATGCAAG TCTGGTATCC GCTTATGCGC CCGGCATTAA ATATAATTAT
GGTCCCGGTT GGATTTATGC CGAGTATTTA ACGCAAGATG GTTATATCGG TCGCAATGGC
GATGTCGGCG AAGGTGATTT TACTGCGCTG TATCTAACAA TGGACTTTTA TTTCTAG
 
Protein sequence
MRLSPLAYTT FFVFPFIVSP VQASNQLAGG VWFNYNQSLH SGANEPNNGT IGDEALVLYA 
DGQADKGQGN WSYSMEWRMG PGSFTDPANN STGDQAGMHK AWVGFDINES YKLVIGKSQV
PFGWKTYNFW PGDMLQGGYG DQMDVGLKLQ GEASNLHYDV AYFHQDDWGK TSTDTMDDNR
HWGASTTYRK VQTWVGNVGF DLTPHQTVGV SLQTGQLQDF TTAEDKVDGD HSAAVVYYKG
TFGNTFLKGE MIQTQRNLPE NYAINNGLER KIENTRYAFE VGRSSGNWTY YLDASWADPK
TKGNDASLVS AYAPGIKYNY GPGWIYAEYL TQDGYIGRNG DVGEGDFTAL YLTMDFYF