Gene Tcr_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1898 
Symbol 
ID3761092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2078804 
End bp2079568 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content46% 
IMG OID637786641 
Producthypothetical protein 
Protein accessionYP_392162 
Protein GI78486237 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTA TCTCTGACCA ACTTGTTTTA TTTGTTGTTT CTCTCGTTGC AAACTTGCTC 
TCTGCTTTAG CTGGTGGCGG GGCAGGGCTG CTACAACTGC CAGCACTTTT ATTTCTAGGG
TTGCCTTTTA GCGTTGCGCT GGCCACTCAT AAAGTTGCCA GTGTCTTTCT GGGCATCGGG
GCGACCTCTC GCCATATCGG TTCTTCCAAA CTTAACCTGC GTTTTGTCTC GATTATTTTA
ATGTTTGGAC TCCCCGGCGT GATTTTAGGG GCTAATTTAA TTTTGCAGAT GGACGATCGT
TGGGCTCAGA TAGCACTGGG AGTTCTGACC TTGGGGTTGG GGATTTATTC CGGTTTAAAA
CCTGAGTTAG GCCAAATCTC TTCGGCAAAG CATCAAACGC TCACCGGCCT GTTATTCGGA
GGCATCGTCT TGTTTTTCAT TGGTGTGTTA AATGGCTCCT TAACTTCTGG AACCGGTTTA
TTTGTCACGA TTTGGCTCAT TGCCTGGTTC GGATTTGATT ATAAAACCGC TGTTGCCTAT
ACGTTAGTGT TGGTTGGTAT TTTCTGGAAT GGCATCGGTG CCTGGACTTT AGGGATGCAA
GGGCAAATTG AATGGAGTTG GTTGCCTGCA CTTATTTTGG GTTCGTTAAT CGGTGGGTAT
CTGGGAGCAC ACTTTTCAAT CGTGCGTGGG AATCAATTGG TTAAACGCAG CTTTGAAGTG
GTCACTATTT TGGTTGGCAT CGCTTTGATT GCGAAAGCGA TTTAA
 
Protein sequence
MESISDQLVL FVVSLVANLL SALAGGGAGL LQLPALLFLG LPFSVALATH KVASVFLGIG 
ATSRHIGSSK LNLRFVSIIL MFGLPGVILG ANLILQMDDR WAQIALGVLT LGLGIYSGLK
PELGQISSAK HQTLTGLLFG GIVLFFIGVL NGSLTSGTGL FVTIWLIAWF GFDYKTAVAY
TLVLVGIFWN GIGAWTLGMQ GQIEWSWLPA LILGSLIGGY LGAHFSIVRG NQLVKRSFEV
VTILVGIALI AKAI