Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1898 |
Symbol | |
ID | 3761092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2078804 |
End bp | 2079568 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637786641 |
Product | hypothetical protein |
Protein accession | YP_392162 |
Protein GI | 78486237 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGTA TCTCTGACCA ACTTGTTTTA TTTGTTGTTT CTCTCGTTGC AAACTTGCTC TCTGCTTTAG CTGGTGGCGG GGCAGGGCTG CTACAACTGC CAGCACTTTT ATTTCTAGGG TTGCCTTTTA GCGTTGCGCT GGCCACTCAT AAAGTTGCCA GTGTCTTTCT GGGCATCGGG GCGACCTCTC GCCATATCGG TTCTTCCAAA CTTAACCTGC GTTTTGTCTC GATTATTTTA ATGTTTGGAC TCCCCGGCGT GATTTTAGGG GCTAATTTAA TTTTGCAGAT GGACGATCGT TGGGCTCAGA TAGCACTGGG AGTTCTGACC TTGGGGTTGG GGATTTATTC CGGTTTAAAA CCTGAGTTAG GCCAAATCTC TTCGGCAAAG CATCAAACGC TCACCGGCCT GTTATTCGGA GGCATCGTCT TGTTTTTCAT TGGTGTGTTA AATGGCTCCT TAACTTCTGG AACCGGTTTA TTTGTCACGA TTTGGCTCAT TGCCTGGTTC GGATTTGATT ATAAAACCGC TGTTGCCTAT ACGTTAGTGT TGGTTGGTAT TTTCTGGAAT GGCATCGGTG CCTGGACTTT AGGGATGCAA GGGCAAATTG AATGGAGTTG GTTGCCTGCA CTTATTTTGG GTTCGTTAAT CGGTGGGTAT CTGGGAGCAC ACTTTTCAAT CGTGCGTGGG AATCAATTGG TTAAACGCAG CTTTGAAGTG GTCACTATTT TGGTTGGCAT CGCTTTGATT GCGAAAGCGA TTTAA
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Protein sequence | MESISDQLVL FVVSLVANLL SALAGGGAGL LQLPALLFLG LPFSVALATH KVASVFLGIG ATSRHIGSSK LNLRFVSIIL MFGLPGVILG ANLILQMDDR WAQIALGVLT LGLGIYSGLK PELGQISSAK HQTLTGLLFG GIVLFFIGVL NGSLTSGTGL FVTIWLIAWF GFDYKTAVAY TLVLVGIFWN GIGAWTLGMQ GQIEWSWLPA LILGSLIGGY LGAHFSIVRG NQLVKRSFEV VTILVGIALI AKAI
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