| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1878 |
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| Symbol | |
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| ID | 3762414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2053565 |
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| End bp | 2055184 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637786621 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_392142 |
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| Protein GI | 78486217 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.501905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCTG AAAAATATCG CCCAACGATC ACGCCCGATT TACCCAATCG CCAGTGGCCG
AACCAACGCC TTACCCAGGC ACCGATTTGG GCAAGTGTCG ATCTACGAGA CGGCAATCAG
GCGTTAGCCA ACCCAATGAC GGTGGAGCAG AAGCTTAAGC TTTGGGATCA ACTGGTGGCG
ATTGGTTTTA AAACCATCGA AATCGGTTTC CCGGCCGCCA GTCAGTTGGA GTTTGATTTT
GCGCGCCGCT TAATTGAAGA AAACCGCATT CCGGACGATG TGACGGTGCA GGTGCTGGTG
CAGGCCAGAG AGCATTTGAT TAAGCGCACT TATGAAGCGT TGCAAGGCGT GAAGCAAGCG
GTGGTGCATG TGTACAACAC CACCTCTACC GTACAACGTG AAAAGGTTTT CTGTAAATCG
AAAGCCGACA TTAAAGCCAT GGCAATCCAA GGCGCCAAAT GGGTACAAAG CTATGCTAAA
GAACACCCGG AATCCGACTG GGTATTCCAG TATTCACCAG AAAGCTTTTC TCAAACCGAG
ACCGATTATG CGGTGGAAGT GTGTCAGGCG GTGATGGATG TGTGGCAACC GACACCAGAC
AATCGTTGCA TTTTAAACTT GCCGGCCACG GTGGAAAGCA CGTCTCCAAA CCGTTTTGCC
GACCAAGTGG AATATTTCAT TACCCATTTG AAAAACCGTG AGTCGGCCAT TATTTCCATC
CATACCCATA ACGATCGCGG CTGTGCCGTT GCGGCGGCGG AACTGTCATT ACTGGCGGGC
GCGGATCGCG TGGAAGGCAC TTTGTTAGGC AATGGCGAGC GCACCGGAAA CATGGACATC
GTCACCTTGG CGATGAACCT TTACAGCGAA GGCATTGACC CTGAATTAAA CCTATCCGAC
CCAGACAGCT GGGTGCCGGT GATTGAAGAA GTGACGAAAA TCGACACCCA TGTTCGCCAT
CCTTGGGTGG GTGAAGCGGT TTACACAGCG TATTCCGGCA GTCATCAGGA TGCGATTCGT
AAATGTTTGA TGCGCCAGAA AGACGATGAA CCGTGGAATG TAGCGTATTT ACCGATTGAT
CCGAAAGATT TGAATCGAAG TTATGAAGCG ATTATTCGTG TCAACAGCCA GTCCGGAAAA
GCGGGTGCGG CATTCGTGCT GACACAGGAA TATGATTTGA ACTTACCGAA ATGGGTGCAG
CAAGATTTTG CGCCTGTTGC ACAAACCATT GCCGAACAAG CCGGTGGCAT TGTCAGCCAC
CAGATGCTGT ATGATGCCTT TATTCAACAT TATCGTTTGG ATAAGTCTTT AGCGGAATTG
AACAATTACC AATTGTCACG CAAGGAAGGC AAAGAGCATT TAAGTGTGGA AGTGAACGGT
GAAACCTGGC AAGGCCAAGG CAACGGCACC TTAAGCGCAC TGTGTGATGC GTGGCAACGA
CGCACCGGAC AGCAAGTGGA TGTGTTGGAT TACAGCGAAC ACGCCTTGCA TGAAGGGAAA
GACTCAAAAG CGATTGCCTA TGTCTATGTG CAGCAGAAAA ACACCAAAAC CATCGGTATC
GCCATGGCGG AAGATACGGT TTCTGCGATG ATTCAGGCCT TACTCTCGAC CATTCGTTAA
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| Protein sequence | MTPEKYRPTI TPDLPNRQWP NQRLTQAPIW ASVDLRDGNQ ALANPMTVEQ KLKLWDQLVA
IGFKTIEIGF PAASQLEFDF ARRLIEENRI PDDVTVQVLV QAREHLIKRT YEALQGVKQA
VVHVYNTTST VQREKVFCKS KADIKAMAIQ GAKWVQSYAK EHPESDWVFQ YSPESFSQTE
TDYAVEVCQA VMDVWQPTPD NRCILNLPAT VESTSPNRFA DQVEYFITHL KNRESAIISI
HTHNDRGCAV AAAELSLLAG ADRVEGTLLG NGERTGNMDI VTLAMNLYSE GIDPELNLSD
PDSWVPVIEE VTKIDTHVRH PWVGEAVYTA YSGSHQDAIR KCLMRQKDDE PWNVAYLPID
PKDLNRSYEA IIRVNSQSGK AGAAFVLTQE YDLNLPKWVQ QDFAPVAQTI AEQAGGIVSH
QMLYDAFIQH YRLDKSLAEL NNYQLSRKEG KEHLSVEVNG ETWQGQGNGT LSALCDAWQR
RTGQQVDVLD YSEHALHEGK DSKAIAYVYV QQKNTKTIGI AMAEDTVSAM IQALLSTIR
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