| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1873 |
|---|
| Symbol | |
|---|
| ID | 3761086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2048325 |
|---|
| End bp | 2049665 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637786616 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_392137 |
|---|
| Protein GI | 78486212 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATC GAATGTTTGA TGTGGTGATT GTTGGCGGCG GAATCACAGG AACCGCACTG
GCTTATACCC TGGCCAAGTA CACCGACATC AAATCCATCG CCATTCTTGA GAAGTACGGC
TCCCTCGCGC CATTGAACTC CAATGCGCGC AGCAACAGCC AGACTTTGCA TTGCGGCGAC
ATCGAAACCA ACTACACGTT GGAAAAAGCG ATTTCAGTCA AGCGTACCGC CAACATGTTG
GTGAAATACG CCGAACAGGT CGATAAAAAC GATTTCTTAT TCAAATACCC GAAAATGATT
CTGGCGGTGG GCGAAGAAGA ATGTGACCGT TTGGAAAAAC GCCATGAAGA ATTTAAAGAA
GGCTTCCCCT ACATGGAACT TTGGGATGCC GAAAAAATTG CCGAAGTCGA ACCCAATGTC
GCGTTAATCG ACGGCAAACC GCGCCCGGAA AAAATCATGG CCAGCGGATG CACCGACGAA
TATTCCGCTG TGAACTACGG CATCCTTTCT AAATCGTTTA TTGAAAGCGC CCGTAAAACC
GGCAAAGACA TCCAGGTCTT TTTAAGTTCG AAAGTCGATG ACATCAAAGA CTTTGAAGAC
CATTATGAAT TAAAAACCGC CCATGGCACT TTCATGGCCA ACTTTGTAGT GGTTTCAGCC
GGTGCGCACA GTTTATTGCT GGCCAACCAA ATGGGACACG GCATGGATTT ATCCACTTTA
CCGATGGCGG GGAGCTTCTA CTTTGCACCC AATATGTTGA ATGGAAAAGT CTACACCATG
CAAAACGACA AATTGCCGTT CGCGGCATTG CATGGCGACC CTGACCTGAC CGAACCGGGC
AAAACCCGCT TAGGACCAAC CGCACTGGCC TTGCCAAAAC TGGAACGTTA CACCGGAGGC
ACTTATTGGG ATTTCTGGAA AACCCTGAAA CTGGACACCA AAGTGTTACG CGTTTTCTGG
GATCTGTTAA AAGACAGCAC CATTCGCAAC TACATTTTCC GTAATTTCTT ATTTGAAATT
CCATGGTTAA ACAAAAAGCT GTTTGTGAAA GATGCGCGCA AAATTTTGCC GAACCTCACA
ACCGACGATT TGACCTATGC TGAAGGATTT GGCGGTGTAC GCCCACAAGT CATCGATAAA
ACCACCAAAC AACTTAAACT GGGGGAAGCC AGTATTGTTC CGGAAACCGG CAATGTCATT
TTCAACATGA CACCGTCGCC AGGCGCCACC ACTTGTTTAG GGAATGCGTA TCGCGATGCA
CAAATCATTT GCGAACGTCT GGGTAGAACC CTGAAAAAAG ACGAACTCAT CAACGATTTG
TTGGATGGAA AAGACCTCTA A
|
|---|
| Protein sequence | MQNRMFDVVI VGGGITGTAL AYTLAKYTDI KSIAILEKYG SLAPLNSNAR SNSQTLHCGD
IETNYTLEKA ISVKRTANML VKYAEQVDKN DFLFKYPKMI LAVGEEECDR LEKRHEEFKE
GFPYMELWDA EKIAEVEPNV ALIDGKPRPE KIMASGCTDE YSAVNYGILS KSFIESARKT
GKDIQVFLSS KVDDIKDFED HYELKTAHGT FMANFVVVSA GAHSLLLANQ MGHGMDLSTL
PMAGSFYFAP NMLNGKVYTM QNDKLPFAAL HGDPDLTEPG KTRLGPTALA LPKLERYTGG
TYWDFWKTLK LDTKVLRVFW DLLKDSTIRN YIFRNFLFEI PWLNKKLFVK DARKILPNLT
TDDLTYAEGF GGVRPQVIDK TTKQLKLGEA SIVPETGNVI FNMTPSPGAT TCLGNAYRDA
QIICERLGRT LKKDELINDL LDGKDL
|
|---|
| |