| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1865 |
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| Symbol | |
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| ID | 3761078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2041997 |
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| End bp | 2042710 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637786608 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_392129 |
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| Protein GI | 78486204 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000200406 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCTCGG ATGCGATTTT AATCACAGGA GCAGGGCAGC GCATTGGCGA ATACCTTGCG
CAACAGTTTT TAGCCCAACA TCAACCCGTT GTTTTTACCT ATCGAACAGA ACGCCCCGCG
GTTGACGCGT TAAAAGCGCA GGGTGCGCTG GGGTTTCAAG TGGACTTTAC TCAGTCGGAA
CAATTGACAC AGTTCTTGCA GGCCTTACCA CAAGAGGTTT CCAGCCTAAG GGCGGTGATT
CACAACGCGT CGTTATGGCT ACCTGACTCA AAAATTAAAA CGGCCGACAT GCTGGCGGAT
TTAATGGCGG TGCATGTCGC CGCACCGTAT CAAATCAACC AAGCTTGCGA GCCATTATTA
CGAAAAAGCC AAACAGCGGT GACGGATATT ATTGCGTTAT CGGACGCCAA AGTGGCTAAA
GGGCATCCCG ACTATGCGGG CTATTTGGCT TCCAAAGCCG GGTTGGAATC GTTAACCTTG
TCGTTTGCCA AAGCGTTTGC ACCGAATATT AAGGTGAACA CGATTGCGCC CGGTCTGGTG
ATTTTTAATG AAGGGGATTC GGAAGCGTAT AAAAAAGCAC GCTTGGCCGA AAGTGCCATT
CCGGTTGAAC CGGGCATGGA TTCGATTTGG CAAGCCGTTC AGTTCTTAAT GAACAGCCCG
AGTGCCACCG GTTCCACCGT GTCACTCGGG CAATTACAGC ACGAAACGTT TTAG
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| Protein sequence | MISDAILITG AGQRIGEYLA QQFLAQHQPV VFTYRTERPA VDALKAQGAL GFQVDFTQSE
QLTQFLQALP QEVSSLRAVI HNASLWLPDS KIKTADMLAD LMAVHVAAPY QINQACEPLL
RKSQTAVTDI IALSDAKVAK GHPDYAGYLA SKAGLESLTL SFAKAFAPNI KVNTIAPGLV
IFNEGDSEAY KKARLAESAI PVEPGMDSIW QAVQFLMNSP SATGSTVSLG QLQHETF
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