| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1830 |
|---|
| Symbol | |
|---|
| ID | 3761043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2005751 |
|---|
| End bp | 2007037 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637786574 |
|---|
| Product | dihydroorotase, multifunctional complex type |
|---|
| Protein accession | YP_392096 |
|---|
| Protein GI | 78486171 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGACTTT TAATCGAAAA CGCTCGTATC ATCGACCCGA GCCAAAAAAT GGATCAAGTA
TCGAACCTTT ATATTTCTCG TGGACGCATC CTTAAAATCA GTGACACCGA CCCGGAAGGC
TTTACACCAG ATCAAGTCAT TGATGGCACT GGTAAATGGA TTTTGCCAGG CCTGGTCGAT
TTACACGCCC GCCTTGCCGA ACCCGGCAGC CGTTATGAAG GAAACATTGC GTCGGAAACC
AAAGCCGCTG TTTCTGGAGG CATCACCACC ATCTGCAGTC CGCCGGACAC CAACCCGGTG
AATGACACTC AAGCGGTCAC GGAACTCATT CAGCGTCGTG CTCGCCAAGC GGCCACGGCA
TTCGTATTGC CGATCGGGGC ACTGACTCAG GGGCTGGAAG GCAAAATGCT CAGCAACATG
GCGGCATTGA AAAACGCCGG CTGCATTGCG TTGAGTCAAG CCAGCCAACC GATACAAAAC
CCGCTGACAT TGAAAAATGC AATGGCTTAT GCCGCCAGCA ATGAAATCTT ACTCATGCTG
CGTTGCGAAG ACACGGAACT GAAAAACAAC GGTGTGGTTC ACAGCGGCGT GATCAGCAGC
CGTTTAGGCC TGTCTGAAAT CCCCGCTTCG GCCGAAACCG CGGCACTGGC GCGAGACTTA
ATTCTGGCTG AAGAAACCGG TGCTCGCGTC CATTTCTCTC AGATATCCAC CGCACGCTCG
TTGGAAATGA TTGCCGACGC CAAAAAACGG GGCATGCCAG TAACCTGCGA TGTGGCCATC
CACCAACTGC ACCTAACCGA ATACGATGTG ATGGATTTTG ATTCCTTGTT TCACGTCACT
CCACCATTGC GAACGCATGA CGACAAAGAA GCCCTGCGTC TCGGAGTTAA AATGGGCATT
ATTGATGCGA TTGTCAGTGA CCACACGCCT TTAGATCGTG ATGTCAAACT GCTGCCGTTT
GGGGAAAGTG AGCCAGGTAT CAGCGGCTTG GAGACGTTAC TGCCTTTAAC CCTAAGATTA
GTCGAAGAAG GGGTTCTGGA TCTCAATACC GCCATCAGCG CCTTAACGCA GCGCCCGGCG
GATATTCTGG GGATTCATAA CGGCAGCCTG ATTGAAGGAC ACTACGCCGA TTTCAGTTTA
TTCAACCCGG AGACGCCTTG GACGCTCAAC CGCTCAGAAA TGGTCAGCCA AGGGGACAAC
TCGCCTTTCC ACGGCTGGGA ATTCACCGGG CAAATTGAAA CGACTTATTT CCAAGGCCGC
CCTGTTTACC GTAACAACCA AGTGTAA
|
|---|
| Protein sequence | MRLLIENARI IDPSQKMDQV SNLYISRGRI LKISDTDPEG FTPDQVIDGT GKWILPGLVD
LHARLAEPGS RYEGNIASET KAAVSGGITT ICSPPDTNPV NDTQAVTELI QRRARQAATA
FVLPIGALTQ GLEGKMLSNM AALKNAGCIA LSQASQPIQN PLTLKNAMAY AASNEILLML
RCEDTELKNN GVVHSGVISS RLGLSEIPAS AETAALARDL ILAEETGARV HFSQISTARS
LEMIADAKKR GMPVTCDVAI HQLHLTEYDV MDFDSLFHVT PPLRTHDDKE ALRLGVKMGI
IDAIVSDHTP LDRDVKLLPF GESEPGISGL ETLLPLTLRL VEEGVLDLNT AISALTQRPA
DILGIHNGSL IEGHYADFSL FNPETPWTLN RSEMVSQGDN SPFHGWEFTG QIETTYFQGR
PVYRNNQV
|
|---|
| |