Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1784 |
Symbol | |
ID | 3761422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1948739 |
End bp | 1949596 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637786522 |
Product | putative signal transduction protein |
Protein accession | YP_392050 |
Protein GI | 78486125 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACCT TAATTAAACA AGCCGCGGCA CTATTATCCA CTATTGAAGT ACCGGATTTA CCAGAGGTTA TCTTGCTTTT AAAAGAAGAG CTTAATAAGA AATTCCCGAA TACGGTAACA ATCGCGAATT TAATCAGTAA AAACCCTCAG TTACTTGCCG AATTTCTAAG CCTAGTGAAT ACCAATGTCA CCAAGGAACG GATGCCGATC CGTGATGCGA AAGCCGCTGT TAATCTACTG GGATTAGATG ACATATTAAA TCTTTTTGTC TCAACCATTA TTTCAAACAC AGTTGCCAAA AATGAACTTG AAAAGTCAAT TTTATCTCAC GGTGCGAAAT CAGGACTAGC GGCAGCAGAG CTTTCTTACT GGGTTTATGA CGTTTCAAGA TCTCAAGCCT ATATGGCAGG ACTTATGCAA AACATTGGAG CCATTTATCT ATCCAAACTC GAACCCGACT TATATGAAGG CATGTTTACA GCTTCGCTTA GCAACCCTAT ATCGGCTTAT CAAAACGAGT TAAAGCATTA TCAAACAAGT CATGTATATA TTGGCAGTTT GTTGGCTAAA AAATGGCATC TTCAACCAGA AATTTATAAA ACGATCCTGT TCCATCACGA TATGGATTTC GCCGTAAAAA CAGTTGGCGA CCAGACCATT AAACATTTAA CGGCCCTGAC CATACTCTCA AATTACATCG TAAGCACCAC AGAGCAGGAT CAGTATATAA ACCAGGAATT AAAAGAATAT CGAGATGCGG CCAAACAGGT TTTATCACTG CCAGATAATG CCTTCACAGC AGCCACCGCA GCCGTTAATA AATGGGGCAG CAAGGGATTG ATTAACGCCA GTCATTGA
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Protein sequence | MQTLIKQAAA LLSTIEVPDL PEVILLLKEE LNKKFPNTVT IANLISKNPQ LLAEFLSLVN TNVTKERMPI RDAKAAVNLL GLDDILNLFV STIISNTVAK NELEKSILSH GAKSGLAAAE LSYWVYDVSR SQAYMAGLMQ NIGAIYLSKL EPDLYEGMFT ASLSNPISAY QNELKHYQTS HVYIGSLLAK KWHLQPEIYK TILFHHDMDF AVKTVGDQTI KHLTALTILS NYIVSTTEQD QYINQELKEY RDAAKQVLSL PDNAFTAATA AVNKWGSKGL INASH
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