Gene Tcr_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1784 
Symbol 
ID3761422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1948739 
End bp1949596 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content40% 
IMG OID637786522 
Productputative signal transduction protein 
Protein accessionYP_392050 
Protein GI78486125 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCT TAATTAAACA AGCCGCGGCA CTATTATCCA CTATTGAAGT ACCGGATTTA 
CCAGAGGTTA TCTTGCTTTT AAAAGAAGAG CTTAATAAGA AATTCCCGAA TACGGTAACA
ATCGCGAATT TAATCAGTAA AAACCCTCAG TTACTTGCCG AATTTCTAAG CCTAGTGAAT
ACCAATGTCA CCAAGGAACG GATGCCGATC CGTGATGCGA AAGCCGCTGT TAATCTACTG
GGATTAGATG ACATATTAAA TCTTTTTGTC TCAACCATTA TTTCAAACAC AGTTGCCAAA
AATGAACTTG AAAAGTCAAT TTTATCTCAC GGTGCGAAAT CAGGACTAGC GGCAGCAGAG
CTTTCTTACT GGGTTTATGA CGTTTCAAGA TCTCAAGCCT ATATGGCAGG ACTTATGCAA
AACATTGGAG CCATTTATCT ATCCAAACTC GAACCCGACT TATATGAAGG CATGTTTACA
GCTTCGCTTA GCAACCCTAT ATCGGCTTAT CAAAACGAGT TAAAGCATTA TCAAACAAGT
CATGTATATA TTGGCAGTTT GTTGGCTAAA AAATGGCATC TTCAACCAGA AATTTATAAA
ACGATCCTGT TCCATCACGA TATGGATTTC GCCGTAAAAA CAGTTGGCGA CCAGACCATT
AAACATTTAA CGGCCCTGAC CATACTCTCA AATTACATCG TAAGCACCAC AGAGCAGGAT
CAGTATATAA ACCAGGAATT AAAAGAATAT CGAGATGCGG CCAAACAGGT TTTATCACTG
CCAGATAATG CCTTCACAGC AGCCACCGCA GCCGTTAATA AATGGGGCAG CAAGGGATTG
ATTAACGCCA GTCATTGA
 
Protein sequence
MQTLIKQAAA LLSTIEVPDL PEVILLLKEE LNKKFPNTVT IANLISKNPQ LLAEFLSLVN 
TNVTKERMPI RDAKAAVNLL GLDDILNLFV STIISNTVAK NELEKSILSH GAKSGLAAAE
LSYWVYDVSR SQAYMAGLMQ NIGAIYLSKL EPDLYEGMFT ASLSNPISAY QNELKHYQTS
HVYIGSLLAK KWHLQPEIYK TILFHHDMDF AVKTVGDQTI KHLTALTILS NYIVSTTEQD
QYINQELKEY RDAAKQVLSL PDNAFTAATA AVNKWGSKGL INASH