Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1781 |
Symbol | |
ID | 3761419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1945947 |
End bp | 1947266 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637786519 |
Product | carboxyl-terminal protease |
Protein accession | YP_392047 |
Protein GI | 78486122 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTTG GCGCAATCTT AGGCGCAATG GCAGTTGTTG GAACCACTGT TTGGGCTGAA GGAGATAATG CTGATGCAGG AACTGAGACG ACGAAAGAAG TATCGGTGCC ATTAGAAGAA TTGCGCGCAT TTGTGGAAGT ATTTGATCGA ATTTCAACAG ATTATGTTGA ACCGATCGAA GATAAAAAAT TGCTGGAAGG GGCTATTGAT GGGATGTTAT CAAGCTTAGA CCCTCACTCT GCTTATCTGC CACCAAAAAA TTATAAAAGA ATGGAAGAAC ATACCACTGG TCAATTTGGT GGACTTGGTA TGGAAGTCGG TATGGAAGAC GGGTTTGTGA AAGTGGTTTC GCCGATTGAC GATACCCCTG CGCAAAAGGC GGGTGTGAAA GCCGGAGATT TGATCATCAA ACTCGACGAA CACCCTGTCA AAGGTAAGTC ACTGGCCGAG GCTGTGAAAA TCATGCGCGG TAAGCCGGGT TCAAAAATTA CGTTGACAAT TGTTCGAGAT GGCGTTGATA AACCGATTGT GATGGTTTTA ACGCGTGCTA TTATTAAAGT GAAAAGTGTA AAAGAGCAAC TTTTAAAAGA TGGCATGGGT TATGTTCGTA TCAGTCAATT CCAGCTGCGT ACAGGTGAAG ATTTAATTAA GTCGATTAAG GCGTTAGAAA AAAAGAATAA AAAACCACTG AATGGCTTAG TGTTGGATTT AAGAAACAAT CCAGGCGGTG TTTTACGAGC GGCCGTACAA GTTTCGGATG CCTTTTTAAA TGATGGCTTA ATCGTTTATA CGAAAGGGCG CGTTAAAAAT TCAGAAATGC GTTTTGAAGC GGAAGAAGGA GATGTTTTGA ACGGTAAACC GATTGTGGTA TTGATTAATG AAGGGTCTGC TTCGGCTTCA GAAATCGTAT CGGGGGCTTT ACAGGATCAA AAACGTGCTC TAATTGCCGG CCGCACCAGT TTTGGTAAAG GATCGGTTCA AACCTTAATT CCATTAAACA ATGGTGGGGC CATCAAAGTA ACAACGGCGC GTTACTTTAC ACCGTCTGGA CGCTCTATTC AGGCTGAAGG GATTGTGCCC GATATTAAAA TTGATCAAGT AAAAATTGAA AAATTGAAAG CGGCTGATTT TACTCGAATT AAAGAAAAAG ATTTATCAGG CCATTTAGAT AATGAAGATG ACAAAATACA AGCCGAAAAA GTCGTTCAAA AAGCCGATAA AGCGCTTGAA GAACTACTGG CCAATGACTA TGAGTTACAC GAAGCATTAA GCTTACTAAA AGGCATGTAC TTTACACAAC AAATGCGAGG ACATGAATGA
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Protein sequence | MFFGAILGAM AVVGTTVWAE GDNADAGTET TKEVSVPLEE LRAFVEVFDR ISTDYVEPIE DKKLLEGAID GMLSSLDPHS AYLPPKNYKR MEEHTTGQFG GLGMEVGMED GFVKVVSPID DTPAQKAGVK AGDLIIKLDE HPVKGKSLAE AVKIMRGKPG SKITLTIVRD GVDKPIVMVL TRAIIKVKSV KEQLLKDGMG YVRISQFQLR TGEDLIKSIK ALEKKNKKPL NGLVLDLRNN PGGVLRAAVQ VSDAFLNDGL IVYTKGRVKN SEMRFEAEEG DVLNGKPIVV LINEGSASAS EIVSGALQDQ KRALIAGRTS FGKGSVQTLI PLNNGGAIKV TTARYFTPSG RSIQAEGIVP DIKIDQVKIE KLKAADFTRI KEKDLSGHLD NEDDKIQAEK VVQKADKALE ELLANDYELH EALSLLKGMY FTQQMRGHE
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