Gene Tcr_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1769 
Symbol 
ID3761536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1930735 
End bp1931856 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content46% 
IMG OID637786507 
ProductHPr kinase 
Protein accessionYP_392035 
Protein GI78486110 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTTCTC ATCTTATTTC AGACCTTAAA CATTACATCG CTTCTGAGGC CTTAGAGCCC 
GAATCGATTA CGATCGCCCT GCCAGGTTTT TCCATTGAAA TAAGTTCTAA CTCGTCATCT
TTATTGAAAA CGTTGAAAAT CTATTTCAAG CCTGTTTTGG TTCCGGCCCC CATTACTGCC
CCTTCCCTCA AAGTGATTGC GTATGAAAAC GATCAATTTA TCGACCGTGG GATTCAATGG
CAAGACTGGA AAAGAGAAGC CGGAAAAAGT GGCCGAAAAG ACAGTTTTAT TGATGTTCAG
GAAAAAAATG AAACACAACG ACTGATCTAT AAAGTGAAAA CAGGCGTGCT ATTTTGGCAA
AAAAGCGACA CGCCTGTGGC CATTGGCCCA GTCGAGCAAC ACCCCAACCA AATCATCAAC
TTTATTCTCA CCCAATATTT GAACGAAAAC CTGCGGCAGG GTTGGTTATT GGGGCATGCC
GCCGGCTTAG AAATACACCA TAAAGGGATT GCCATTGCAG GCCTATCAGG CGGTGGAAAA
TCGACCTTAA TGTTACACCT ATTGGAATAT GGTGAGCACT TTATCAGCAA CGATCGGTTG
TTGTTGAATG CACAAGAAAC CGCCAGGCCT GGCTATTTTT GGATGCGCGG CATCCCTAAG
CAGCCTAGAA TCAACCCCGG CACCATTGTG CACAACGCGC GCTTACACAA GTTGATCAGC
CAAGAACGCC GACAAGAATT ACTGGCCCTG CCAACCGAAA CGCTTCGGCA ACTGGAAGAA
AAATATGACG CCGACGTCAA CACACTTTAT CACTCCAATT GCTTCAAACC CGAAGCCGAA
CTGAATGCTT TTGTGATTCT CAACTGGGCG TCAGACAGCG TCGATAAAAC GCAACTGAAC
CGCACAACGC TAAACCAATC ACCAAAGCTG CTGGAAGCCA TTCTCAAAAG TCCCGGTCCT
TTTTATTCCG ACTCAGATAA CGTGTTTTTA GCCAACCAAA CGCAACCTGA TGCGGCCGAT
TACCTAAACC GGTTAGGCGA CATACCTTGC TTTGAGCTCA CAGGTAGAAT TGACTTTCAA
AAAGCGTGTG CATTGGTTTT GGATGCCATT CAAACACTCT AA
 
Protein sequence
MPSHLISDLK HYIASEALEP ESITIALPGF SIEISSNSSS LLKTLKIYFK PVLVPAPITA 
PSLKVIAYEN DQFIDRGIQW QDWKREAGKS GRKDSFIDVQ EKNETQRLIY KVKTGVLFWQ
KSDTPVAIGP VEQHPNQIIN FILTQYLNEN LRQGWLLGHA AGLEIHHKGI AIAGLSGGGK
STLMLHLLEY GEHFISNDRL LLNAQETARP GYFWMRGIPK QPRINPGTIV HNARLHKLIS
QERRQELLAL PTETLRQLEE KYDADVNTLY HSNCFKPEAE LNAFVILNWA SDSVDKTQLN
RTTLNQSPKL LEAILKSPGP FYSDSDNVFL ANQTQPDAAD YLNRLGDIPC FELTGRIDFQ
KACALVLDAI QTL