Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1756 |
Symbol | nudE |
ID | 3761523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1918463 |
End bp | 1919014 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637786494 |
Product | ADP-ribose diphosphatase NudE |
Protein accession | YP_392022 |
Protein GI | 78486097 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AAAAAACGCC CGTTATTCTA ACGAAAAAAG AACTGGCCAA CACGCGTATT TTTACCGTGG AAGGCTTGGA TATTGTGTAT GGAAATGACA CTCAAGTTCA ATTTGAACGG TTGGTGAGTT CCGTTCATGG TGCCGTTTTA ATTGTACCGA TTATGGATGA CTGTTTGGTG CTGATTCGGG AATATGCCGC CGGCGTTGAA CGCTACGAAC TAGGGTTTCC AAAAGGAAAG ATTGATCCGG GAGAAACTTG GGAAGAAGCG GTACTGCGAG AAAGTCAGGA AGAAATTGGA TTTTTGCCGG CTGACATTGC TTTAATGGAT TCGGTGACTC TGGCGGCGGG TTATATGTCA CACCAAACGC ATCTGGTGTT GGCAACGGGT TTGTCTCCCA GTGATGCCGA AGGAGATGAG CCCGAGCCGT TGGAAGTAGT GCACTGGCCA ATTAAAGATT GGCCGGCGTT ATTGGCACAC CCAGAGTTTT CAGAAGGTCG AGCTTATGCG GCTTTAATGT TGACTTTGCA GCATTTAAAG CATATTGGAT AA
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Protein sequence | MKKKKTPVIL TKKELANTRI FTVEGLDIVY GNDTQVQFER LVSSVHGAVL IVPIMDDCLV LIREYAAGVE RYELGFPKGK IDPGETWEEA VLRESQEEIG FLPADIALMD SVTLAAGYMS HQTHLVLATG LSPSDAEGDE PEPLEVVHWP IKDWPALLAH PEFSEGRAYA ALMLTLQHLK HIG
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