Gene Tcr_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1742 
Symbol 
ID3762004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1901544 
End bp1902515 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content47% 
IMG OID637786480 
Producthypothetical protein 
Protein accessionYP_392008 
Protein GI78486083 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAT CGGTAGAACA ACTGTGTGAC TTTGTTGACC TATCCGCCGA TGACTTGCCT 
ATCGATTTTG ACAGCGCGTT TCCTTTTAAA GTGCCAAAAC ACTTCGCAAA CCAAATCGAA
AAAGGCAGTC CAAACGATCC TTTATTGAAA CAAATTCTAC CAGGCCTGGC GGAACAGGAA
TTGTACCCTG GATTTTCTCC TGACCCGGTT GGCGATCTAG CCGCCAACCC GCAACCCAGT
TTAATTCACA AATATCACGG GCGCGCCTTA CTGATTGCCA GTCCGCGTTG CGACATTCAT
TGTCGTTATT GTTTTCGGCG ACATTTCCCT TATGAGCAGG CTAAAAAACA ACATTGGCAA
GCGGCACTGG AAAACATTGC TCAAGACCAT TCGATTACCG AAGTTATTTT AAGCGGTGGC
GACCCGATGA CGCTGTCTGA AAACACCCTG ATCGAATTAG TACATGAGAT TGAAGCCATT
CCGCACGTCA GCACGCTGCG AATGCATAGC CGAACTCCGA TTGTGGCCCC GCAAAAAGCA
CACCGCCCAA CGCTTTTAAA AGCGCTGTCA AAATCGCGTT TACAAACCGT GCTGGTGGTA
CATTGCAACC ACGCCAATGA ACTGACTCCA GAGTCTGCCG ACCTGATGCA GCAATTTCGC
CAGTCCAATG TCTTTTTGTT AAACCAGACC GTGCTCCTCA AAGGCATTAA TGATTCAGCA
GACACATTGA GTGCTTTGAG CAAAAAATTA TTCTCTCAAG GGATTTTGCC TTATTATTGT
CATTTATTAG ATAAGGTTTC CGGGTCCGGT CATTTTGACG TCCAAAAACA CCAGGCCTGG
GCAATATTCG ATCAATTGCG CCAGGCGTTG CCCGGATATC TTGTGCCACG TTTTGTGGAA
GAAATCGCAG GCGAGCCTTA TAAAACCTTA TTAACCGACC CAAATTCTCA GGACATAAAG
CCAACGGCAT GA
 
Protein sequence
MIQSVEQLCD FVDLSADDLP IDFDSAFPFK VPKHFANQIE KGSPNDPLLK QILPGLAEQE 
LYPGFSPDPV GDLAANPQPS LIHKYHGRAL LIASPRCDIH CRYCFRRHFP YEQAKKQHWQ
AALENIAQDH SITEVILSGG DPMTLSENTL IELVHEIEAI PHVSTLRMHS RTPIVAPQKA
HRPTLLKALS KSRLQTVLVV HCNHANELTP ESADLMQQFR QSNVFLLNQT VLLKGINDSA
DTLSALSKKL FSQGILPYYC HLLDKVSGSG HFDVQKHQAW AIFDQLRQAL PGYLVPRFVE
EIAGEPYKTL LTDPNSQDIK PTA