Gene Tcr_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1733 
Symbol 
ID3761032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1893620 
End bp1894507 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content45% 
IMG OID637786471 
ProductGHMP kinase 
Protein accessionYP_391999 
Protein GI78486074 
COG category[I] Lipid transport and metabolism 
COG ID[COG1577] Mevalonate kinase 
TIGRFAM ID[TIGR00549] mevalonate kinase 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAGC ACAGCGTTGT CTATGGACAC AAAGCCATAG CGAGCTCTCT CAACCATCGT 
CTTTCCATCC ATTGGTCAAC ACGCAATGAT AATGAAATCC ATATTGTCTC AACGTTGGGG
CATCATATCA CCGACACCCA AACGTTAGCC GAACACCCCA GTTTAAAGTG GGTCATCGCA
TGCTTGAAAC ATTATCAAAC CAAATTAATT ACGGGTCTGA ACATCGAGAT TGATAGCGAC
TTTAGCTCAA CCGTTGGACT GGGCAGTTCG GCTGCGGTTT TAGCCGCCAT GTTGGGAGGG
CTTGATTACA TCACTCAAGA AAAAGCGTCA TTAGAGGCGT TATTTGACAC AGGACTTAAG
ATTATTCAAA GCATTCAAGG GCGAGGCTCG GGAACAGATT TGGCCGCCAG TTTACACGGT
GGCATTATTT TGTTTGACCC TCAAAATCAA TCCGTTCAAA AACTTGTCTG TGATTTTCCA
ATTTCATTGG TGTATTGTGG TTACAAAACC TCGACCGCAA CAGTGTTGGA AAAAGTCGCC
ACCGACTGGC AGGATCAGCC TGAATTATTA CACCATTTGT ATCAAATAAT GGGACAAACC
ACCGAAGCCG CCTACCAAAG CTTGGTCAAC AATGATGTCG ATTCCTTTTA CAAACGGGTT
AACACCTACC AAGGTCTAAT GGATGCTTTG GGCGTCAATG ACGCGACTCT GTCTCATTTA
GTTTATCAAC TCCGCCAAGA TCGTGAAATA CAGGCCAGCA AAATTTCCGG ATCCGGGCTT
GGAGACTGCG TCATCGGCTT TGGGATTATG CAACCTCAAA CCTTACCGAA TTACGAAAGC
ATTTTAGCTC ACCTATCAAC AGAAGGATTA AGCATCACGA CAAATTGA
 
Protein sequence
MGEHSVVYGH KAIASSLNHR LSIHWSTRND NEIHIVSTLG HHITDTQTLA EHPSLKWVIA 
CLKHYQTKLI TGLNIEIDSD FSSTVGLGSS AAVLAAMLGG LDYITQEKAS LEALFDTGLK
IIQSIQGRGS GTDLAASLHG GIILFDPQNQ SVQKLVCDFP ISLVYCGYKT STATVLEKVA
TDWQDQPELL HHLYQIMGQT TEAAYQSLVN NDVDSFYKRV NTYQGLMDAL GVNDATLSHL
VYQLRQDREI QASKISGSGL GDCVIGFGIM QPQTLPNYES ILAHLSTEGL SITTN