Gene Tcr_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1713 
Symbol 
ID3761011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1873637 
End bp1874518 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content47% 
IMG OID637786450 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_391979 
Protein GI78486054 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGC AAACCGATTT AGAACCCCTC GCGCAACAGC TTGATCAATC AGACGACTAC 
CAAGTCTTAC GACGTTTCAA ACCGCTTCCC AGTTATCGAT CCCCAGCTGG CGAAACGGTG
CACAAGGTTT GTATTATTGA TACTGAAACC ACCGGACTGG ATACTCGCGT GTGTGAAATC
ATTGAACTGG GGTATCAAAT CGTTGAATTC GATTCACAAG GCAACTTCTA CCAAATTTTA
ACCGCGAAAA ACTTTTTAAA TGAACCTGAA GGCGAGATTT CGGCCGAAGT CACCCAAGTG
ACGGGGTTAA CACTGGACGA TGTCAAAGGG CATCAAATTC CTTGGGCGGA AGTGGAAGCG
GATATGGCGG ATGTACAACT CTGTGTCGCA CATAATGCAG CGTTTGACCG CCCTGTCGTT
GAACGTTACA GCGATTGTTT TATTGATAAA GTCTGGGGTT GCTCAGCGGT CCAAGTTGAT
TGGTTTCATT TAGCCAAAGT CGGTTCGCGC AGTCAGGAAT TTCTGTGCTG GAAAGTCGGT
CAATTTTTTT ATGGGGCTCA CCGGGCACTG GACGATGTGC AAGCCTTAAC CCACTTACTC
ACTTTCCCGA TTTCAGAAGC GGCTTTACCG GCGTTCCATT TTTTACTCGC CTCCGTACGC
CAGCAAAAAG TGTTGATTAA AGCCACCAGC GCGCCTTTTG AGTTAAAAGA CGATTTAAAA
CAACGCGGTT ATCGTTGGCA ACCGACAGAG CGTGTCTGGC AAAAAGTCTT TGAAGCCAGC
CAACAACAAG AAGAAATTGC CTGGCTCATT GAAAATAATA CCCCTAATCC AGACATCATC
AAGCTCAAGG CCACCGACAC CTTTTCCATC CGGGCGCAAT AA
 
Protein sequence
MTPQTDLEPL AQQLDQSDDY QVLRRFKPLP SYRSPAGETV HKVCIIDTET TGLDTRVCEI 
IELGYQIVEF DSQGNFYQIL TAKNFLNEPE GEISAEVTQV TGLTLDDVKG HQIPWAEVEA
DMADVQLCVA HNAAFDRPVV ERYSDCFIDK VWGCSAVQVD WFHLAKVGSR SQEFLCWKVG
QFFYGAHRAL DDVQALTHLL TFPISEAALP AFHFLLASVR QQKVLIKATS APFELKDDLK
QRGYRWQPTE RVWQKVFEAS QQQEEIAWLI ENNTPNPDII KLKATDTFSI RAQ