Gene Tcr_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1696 
Symbol 
ID3760974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1851326 
End bp1852021 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content46% 
IMG OID637786433 
Producthypothetical protein 
Protein accessionYP_391962 
Protein GI78486037 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA CGTTAGAACA AACACAGCAA CAAATTTTGA AACATCATGG TGGCGATGGT 
GCTCATGCCC GTCAGATGAT TACCAATAGT TACGACCGAC GACATGATGA GGCCTTTTGG 
CAGTTTTGGG ATGATGTGAT GGCGCTGAAC CACCAGCCGA AAGATGGAGT GCTGGATATG 
GGAGCCGGAA TCGGGCAGTT TGTGAAAGAC TGCGCAGAAC GTTATCCGGA ATCGAAGATT 
TATGGTATTG AAGCAGCTCC TTACATGCTC CAAAACCCGC TTGCGTTACC TGATAATGCA 
GTACTTTTAG TGGATGATTT GAATCAGCCT CAAGCAGAGA TGGCACCGGG AAGTTTAAGC 
ATGGTAATGG CCAATATGGT GGTGCACGAA CTCATTCAGC CAATTAAGAT GTTCAAAGCG 
GCGTATGAGT GGTTAAAACC AGGTGGTCGA TTGTGTGTGA TTGATGTGGT TCGTCAGCCG 
TTGGAGGCTT ATCTGAATCA ACGTTATGCC GACACTCAGG TGTGGGGAGA CCAAACCTCC 
GTTGCCGATT TGGAAGATGC GTTTGAACAT TTTCAGGAAC ATAACCGCTA TCATCTTGAC 
GATATTGTTT TTATGCTGAC GTTGGGCGGG TTTAAGTTGA TTGAGAAAAC ACCACAGCGA 
GAAGGGCGCT TTGTTCGGAT TGTGGTGGAA AAATAA
 
Protein sequence
MTKTLEQTQQ QILKHHGGDG AHARQMITNS YDRRHDEAFW QFWDDVMALN HQPKDGVLDM 
GAGIGQFVKD CAERYPESKI YGIEAAPYML QNPLALPDNA VLLVDDLNQP QAEMAPGSLS 
MVMANMVVHE LIQPIKMFKA AYEWLKPGGR LCVIDVVRQP LEAYLNQRYA DTQVWGDQTS 
VADLEDAFEH FQEHNRYHLD DIVFMLTLGG FKLIEKTPQR EGRFVRIVVE K