| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1682 |
|---|
| Symbol | |
|---|
| ID | 3760960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1836101 |
|---|
| End bp | 1837096 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637786419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_391948 |
|---|
| Protein GI | 78486023 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTT TAATGGTTTC TGGATCGATA CCACCTGAAC CGTGTGGTGT CGGTGATTAC
ACTTATTATT TAACAGGCAT ATTAAATACT AAAGGGGTTA GCGTCAGTCT TTTAAAATTG
AATTTCTTAT CTTTATTAAA ACTTCTGAGG GTAGATAAAG ACGTATTAAT TCATATTCAA
TACCCATCTA GGGGTTTTGG TATAAGCTTG TTGCCACAAT TTGTTACATT ATTTAAGATG
CCCGTAGTAA CTTTGCATGA GTTTAGTCAA GTGCACTTAT TGAGAAAGAT TTCAGAGATA
CCTTTTCTTA TATTTTCTAG ACGTATTATT GTTACAACTG AGCATGAAAG AGAAGCAATA
ATTAAACTTT ACTCAGGGTT TAATAAAAAA ATTTGCGTAA TACCTGTATC AGCGGCTTTT
AATCCCGTTG GAGAGGTTAG AAGTTTTAAA CATCGTTCTG GTATAGCATT TTTCGGATTA
ATGCGGCCTA ATAAAGGTAT TGAAGAGTTT CTTGGCCTGG TCGAAGAGCT AAGGTATAGA
AAACTTGATA TTCCCGTTCG AGTTTTTTCG GCTATCCCAG TTGGTTCTGA AAAATATTTT
GAGGGAATAA AATCTAGTGC GGATGGTTTA GATATTGAGT GGTATCTTAA TAAGCCGTTA
AAGGATGTCT CTTCAGGTTT ATTGAGATCT AAGTATTCAT ATTTACATTT TTCTGATGGA
GTAAGTGATC GACGCTCATC ATTTATGGCT GCTATTTCGC ATGGTTTATT AACCATTAGT
AATTCCGGTC CTATGACTCC TGTAATTTTA AAAAATGCTT TTATTGATGC TCAGACACCA
CAGCAAGCTA TTGAAGAATT AATTTTACTT GAATCCAATC ATGAAAAATC AGATAAGTTA
CAGCAAGATG CAATGAAAGC TTCAAAAGCT TATTCACCTG AAAGAATCAC AGAGTTGCAT
ATTAAGCTAT ATAAAGGTGT TTGGCATGAA GCTTAA
|
|---|
| Protein sequence | MKVLMVSGSI PPEPCGVGDY TYYLTGILNT KGVSVSLLKL NFLSLLKLLR VDKDVLIHIQ
YPSRGFGISL LPQFVTLFKM PVVTLHEFSQ VHLLRKISEI PFLIFSRRII VTTEHEREAI
IKLYSGFNKK ICVIPVSAAF NPVGEVRSFK HRSGIAFFGL MRPNKGIEEF LGLVEELRYR
KLDIPVRVFS AIPVGSEKYF EGIKSSADGL DIEWYLNKPL KDVSSGLLRS KYSYLHFSDG
VSDRRSSFMA AISHGLLTIS NSGPMTPVIL KNAFIDAQTP QQAIEELILL ESNHEKSDKL
QQDAMKASKA YSPERITELH IKLYKGVWHE A
|
|---|
| |