Gene Tcr_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1632 
Symbol 
ID3761929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1784986 
End bp1785489 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content40% 
IMG OID637786369 
Producthypothetical protein 
Protein accessionYP_391898 
Protein GI78485973 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0596181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATA AAGTTTTCTC TCTTCGTTTT TCAGACATTA AATGGCTGTT AATATTCAGT 
TACTTTATTT CTGTTGTCAT TGATAGCATG ATGATTCTAA GCTTCAACAT CAACTTTGTG
CCTTATTTCA CGCTTCTCAT CCTATTATTC TGGTCGACGC AAATTCTTAA CCAAACTCAC
TTATTTTCAG CGTTTGCACT GGGCCTTCTG TTCGATGCCT CGATGAATAC CCCACTAGGA
TCCCACAGTT TAATTTTTGT GACCATCACC TTCTTGATGC TACGATCACG CTTACGATTT
AAAGGATACC CTCTCTGGCA ACAATCCATG ATTGTCGGCA GTTATTTCAT CATATTCCAG
GCCATGAGCT GGTTTATATT TCACCCGGTT TTAGTGGGGA ATGCATTATT GTATTACTGG
ATTGAGCCGT TACTGGCCAT TCTGATCTGG CCTGTATTAA CTCAAGTAAT GCATCGATTG
ACCCACCGTT CTGTCTTTAG TTAA
 
Protein sequence
MSDKVFSLRF SDIKWLLIFS YFISVVIDSM MILSFNINFV PYFTLLILLF WSTQILNQTH 
LFSAFALGLL FDASMNTPLG SHSLIFVTIT FLMLRSRLRF KGYPLWQQSM IVGSYFIIFQ
AMSWFIFHPV LVGNALLYYW IEPLLAILIW PVLTQVMHRL THRSVFS