Gene Tcr_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1586 
Symbol 
ID3760845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1735810 
End bp1736601 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content42% 
IMG OID637786322 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_391852 
Protein GI78485927 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000409693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATTT CTTTTACCGC TTTAATGGGA TACATTCTCG GCTTAGGCCT TTTCGTTCTT 
GCCGTATACC TCAACACAGA CAATTACTTA ATGTTTTTCA GCCTATCCAG TTTATTGATG
GTACTGGGTG GAACCATTGC CGTTGCGATG ATTTCATTTG AAGGCATTAA TGTTTTATTA
GCTATGAAAG CAATTTTTGC AACCTTGGCA ACCGCCAAAG TGAATACTCG CAAACTTTAT
AATGATGTCG GTGTTTTAAT CGATTGGGCC ATAATCGTCC GCAAAGAAGG GCTTCGTAAA
TTTGAAAACA CTGTCGTGCT TTCTAAAGAC GAAGACCAAA ACTTTTTAGG TCAATCCTTT
TTGTATCTTT TATCCGGTTA CAAAGGCCAA AAACTGATGA CGTTATTAGA ACATACTCGC
CAATCCATGT ATGATCGCCA AATGATGCAG GCAAAAGTTT TAATGACAAT GGCGTCCGCC
GCGCCTGCTT TTGGCATGAT AGGAACACTG GTCGGGCTTG TCATCATGCT CAACAGCATG
GAAGGCGATC CTTCAAAAAT AGGTGGCGGG CTTGCCGTTG CCTTGCTGAC AACACTTTAT
GGTGTTTTGA TGGCGCAATT AATTTTCAAA CCGGCCGCAC GAAAAATTGA GCAAAAACAA
GACCTGGAAG CTTACCGTAA TCACATCCTT ACTGAAGGTA TTTTACTCAT GGCCGAAGGA
GGATCACCCA CACACATTCA AGATGCCATG AATGCCTTTT TAGATCCCCG TTATCAATTT
AAGCGTGCTT AA
 
Protein sequence
MHISFTALMG YILGLGLFVL AVYLNTDNYL MFFSLSSLLM VLGGTIAVAM ISFEGINVLL 
AMKAIFATLA TAKVNTRKLY NDVGVLIDWA IIVRKEGLRK FENTVVLSKD EDQNFLGQSF
LYLLSGYKGQ KLMTLLEHTR QSMYDRQMMQ AKVLMTMASA APAFGMIGTL VGLVIMLNSM
EGDPSKIGGG LAVALLTTLY GVLMAQLIFK PAARKIEQKQ DLEAYRNHIL TEGILLMAEG
GSPTHIQDAM NAFLDPRYQF KRA