Gene Tcr_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1578 
Symbol 
ID3760837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1726895 
End bp1727560 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content36% 
IMG OID637786314 
Producthypothetical protein 
Protein accessionYP_391844 
Protein GI78485919 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA AAATCAAAAT TACATTTCTA GGTGACCTTC TTTGTATCTG GGCTTACTCC 
ACCCATGCAC TCTTAAAAAA GTTAAAGCAT GAGTACGCTA ACTGCATTGA AATTGATTAT
CGGTTTATTT CCGTGTTCGG TGATGCTGAA AAATTTATAG ACAACGGCTG GCACGATAAA
GGAGGCTATT CTGGTTTCTC TAATCACCTA CAAACAGTTG CAAGTGAACT TGGATACATT
AACGTCAACT CAGTCATTTG GAATGATTGC AAACCCAAAA CTTCTTCTAT GGCTCATTTG
TATATGAAGG CAATCCAGTT ATGGGAGCAA AAAAATATGA GTTCATCTGA TAGCCAAAAT
CCCCCAAAAC GTAAAAGTGA AGAAGTACTG TGGCAAATGA GAGTGCTTTT TTTTGAACAG
GGTAAAGACA TTTCTAATAC AAAAATTCTG GATAATTTAT TAAAAAACGC TAACATAGAT
TCTGAACAAA TTACCCCATT TCTAGAGGAT GGTTCAGCTA TGGCATCATT ACTAAGTGAT
TACGAACTGA AGCCACAACT AAAACTTGAT GGAAGTCCGA CCTTGCTGTT GAATGCAAAT
CGTCAAAAAT TGTATGGCAA TATTGGCTAT GAAGTCATTA AAGCAAATAT TGAGGCGCTA
CTTTAA
 
Protein sequence
MTKKIKITFL GDLLCIWAYS THALLKKLKH EYANCIEIDY RFISVFGDAE KFIDNGWHDK 
GGYSGFSNHL QTVASELGYI NVNSVIWNDC KPKTSSMAHL YMKAIQLWEQ KNMSSSDSQN
PPKRKSEEVL WQMRVLFFEQ GKDISNTKIL DNLLKNANID SEQITPFLED GSAMASLLSD
YELKPQLKLD GSPTLLLNAN RQKLYGNIGY EVIKANIEAL L