Gene Tcr_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1551 
Symbol 
ID3760810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1699058 
End bp1700251 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content44% 
IMG OID637786287 
Producthypothetical protein 
Protein accessionYP_391817 
Protein GI78485892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000633528 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTGC TAATTAAGAA ACCCGCTTTT AATTCTCGCG GTTCGGCTAT TATGGCGGCC 
GCCATCAGTT TCTCATTTTT AGTCACTGGC TGTTCTTCAA CCCCTTCAAG TCAAAAAAAT
GCTGACAGTG TGTTGGATTA TGATGCCGAT ACCTCTTATC GTGATACCGA AAAAAGTTTG
TCAAAAGACT TAGCGGTTCC ACCCAACCTG TTTTTGCCTT CCAAGAAACA AGATGAATTC
GATATTGCCA TCTCAAAGGC CAGTACTTTA GAAGAAGAAT ATCGTTATAT TCCAACGTAC
CGTGCTGATA ATTTGATGGT TAAATCGAAT TTATCTGAAC GTTGGCTGGA AATCAAAGGG
ATGTCGAGTG AAAAAGTTTG GCAAGGCGTG CAGTCTTTTT TAGTGTCGTT GGGAATGCCT
GTTAAAGAAG CGCGCAAAGA CACAGGTTTT ATCCGTACAG AGTTTGTGCC TCGTAAAGAA
TTGGTTCCAT TGGACGATCA AGGGCCTTTA ACCAAACTGT TGAACAGTTG GCGACCAGAG
CTGGCGGACG GTCTTTATGA TCGTTTGATC GCTCAGGTGG AGTACGATGC GGATAAAGAT
GTTACGCGCG TTTACTTCCA TCATTATGTG GTGTCTGATC CCAGTGTCGC CGATTCAGAA
GACGCGGCGG TCGTTGTGGA TTCTGGCTGG AAAGTGAAAC CTTATAACCC GTTGATTGAA
GCCGAAGCGT TGTATCAAGC CATGATTTTC TTTGGCGCGT CGCAAGGGGA ATCTTTAAAA
GCCATTCAAA TGACACAAAA TCAAGTTCAC TCAGAACAAG ATGATGCAAC CAACGGACTG
AAAGTGGATG CTTCTCCTGC AGAAACCTGG TCGTATTTGA AAGCCATGTT GTATCGTTCT
GGATGGTTTT ACGAGCACAT TAAACCGGTC ACAAAAGAAG TTTGGGTGAT TGTTCCGGAA
TCGGCACGGA AAGAGAATAG CTTAGGATCA AAGCTGGCCT TCTGGCGCAG TGACGATGAC
GCTGAAAAAT ATATTCCAAA GCGTATTAAG TTCACTGTTG AAACCCTTAA TGAGCAAACA
CCTGATCGTT CAAGCGGGAG TCTGTTAAAG GTCGAAACAG CGGAAGCATC AGAGCCTCTA
ACACGTGAAA AGCGCCATTA CATTTTTGAA TCCTTAGGAT TGCTGAAACC GTAA
 
Protein sequence
MFLLIKKPAF NSRGSAIMAA AISFSFLVTG CSSTPSSQKN ADSVLDYDAD TSYRDTEKSL 
SKDLAVPPNL FLPSKKQDEF DIAISKASTL EEEYRYIPTY RADNLMVKSN LSERWLEIKG
MSSEKVWQGV QSFLVSLGMP VKEARKDTGF IRTEFVPRKE LVPLDDQGPL TKLLNSWRPE
LADGLYDRLI AQVEYDADKD VTRVYFHHYV VSDPSVADSE DAAVVVDSGW KVKPYNPLIE
AEALYQAMIF FGASQGESLK AIQMTQNQVH SEQDDATNGL KVDASPAETW SYLKAMLYRS
GWFYEHIKPV TKEVWVIVPE SARKENSLGS KLAFWRSDDD AEKYIPKRIK FTVETLNEQT
PDRSSGSLLK VETAEASEPL TREKRHYIFE SLGLLKP