Gene Tcr_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1539 
Symbol 
ID3762269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1679027 
End bp1679449 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content41% 
IMG OID637786275 
Product4-hydroxybenzoyl-CoA thioesterase domain-containing protein 
Protein accessionYP_391805 
Protein GI78485880 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGC AACACCCTTC ACCGTTTATT TTAGAGCACA CCGTTTCTGA AGAAGATCTG 
GATTTCCTTC GACATGTGAA TAATAAAAAG TATTTAAGCT GGCTTGAATG GGTTTCTTGG
CAACACAGTC TATCCGTTGG CATTGATCAG GCCCTACAGC AGAAAGTTGG CAAAATCATG
GTGGTTAAAC AGCATGAGCT GAATTATCAT GCAGGGTGTT TTTTAGATGA TGAACTGCTC
ATTGGCACTT GGGTTGGAGA CCAAATCGGT TGCTGCCAAC GTAAACGTTT TTATCAAATT
TTTAGAAAAT CGGATCAACG TTTGGTTTTT TCTGGGCACA CGTTATGGGC TTGTATGGAT
TTAAAAACCT ATCGTGCCAG CGTCATCCCT GACGAATTCA TTCAACCATA CCTTGAAAAC
TGA
 
Protein sequence
MKWQHPSPFI LEHTVSEEDL DFLRHVNNKK YLSWLEWVSW QHSLSVGIDQ ALQQKVGKIM 
VVKQHELNYH AGCFLDDELL IGTWVGDQIG CCQRKRFYQI FRKSDQRLVF SGHTLWACMD
LKTYRASVIP DEFIQPYLEN