Gene Tcr_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1524 
Symbol 
ID3762094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1661583 
End bp1662350 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content42% 
IMG OID637786260 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_391790 
Protein GI78485865 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.572139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTT CAACGTTTAT CGGGTTGTTT CTTGGAATAT CCATTGTCAT CACCGCCATG 
GCGATGGGAT CTTCTATTCT TATTTTTGTC AATATTCCCG GATTGATGAT TGTCTTAGGC
GGTACCATCG CCGCGACAAT GATTCGTTAT TCCTTTAAGG AAACGCTTCA TGCCATTGGG
ATGTCTTTTC AAATTGTTCT CCCCTCTAAT GACATTAAAG ATAAAAACGA ATTGGTGGAT
TTAACAGAAG ACCTATTAAG ATTATCGCGT AAAGATGGTT TTTTAGTGTT GGATAAGCAA
GAAGTGAATC ATGGTTTTTA TCGCCATGGT GTTCGAATGC TGGTGGATGG TTATTCCAAA
GAAGTGATCA AGCAGTCCTT GATGGAAGAA AATAAGCTTT TCGTCGAACG GGCTACAACC
AGTGCAGGAG TGTTTTCATC GATTGGAGGC GCGGCACCCG CATTCGGAAT GATTGGAACC
TTAGTTGGCT TGATTCAAAT GTTGTCTAAT TTATCTGATC CCAGTTCGAT TGGCCCTGCG
ATGGCGGTGG CTATGTTAAC AACATTATAT GGCGCGATGA TTGCCAATTT ATTCGCTTTG
CCTATGGCAG ATAAAATCAA CATATGGGTG CAAGAAGAGT CTGTTCGACA ATTTATGATT
ATTGAAGGAT TGATGGCGAT TAGTGAAGGG CGTAACCCAG GTATGATGCG AGAGTTGTTA
TCCCCTTATC TAGAAAACAA GCCGTCTGCG GAAGAGGTGG TTGCTTGA
 
Protein sequence
MSFSTFIGLF LGISIVITAM AMGSSILIFV NIPGLMIVLG GTIAATMIRY SFKETLHAIG 
MSFQIVLPSN DIKDKNELVD LTEDLLRLSR KDGFLVLDKQ EVNHGFYRHG VRMLVDGYSK
EVIKQSLMEE NKLFVERATT SAGVFSSIGG AAPAFGMIGT LVGLIQMLSN LSDPSSIGPA
MAVAMLTTLY GAMIANLFAL PMADKINIWV QEESVRQFMI IEGLMAISEG RNPGMMRELL
SPYLENKPSA EEVVA