| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1491 |
|---|
| Symbol | |
|---|
| ID | 3761613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1613307 |
|---|
| End bp | 1614716 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637786222 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_391757 |
|---|
| Protein GI | 78485832 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGTG TTAAGTACAT TATTTTAGGG GCAGGCTCAT CCGGTTTAAC CGCTTTAGGT
CGTATCCGCC GTGAAACAGA TGATTTCGTG ATGATTAATG GCGGGGCATT TGGAACAACC
TGTGCTCGAG TAGGGTGTAT GCCATCAAAA GCTTTAATTC ATTGTGCGGA ACATTTTCAT
GCTCGTAAAC ATTTTTATGA TTTTGGTATT GACGGTGCGG ATGGTTTAAC CATTGATCAT
GCCGCGGTAA TGAAGCGCGT TAGAACTTTT CGAGATCGTT TTACGTCGGG TGTTCAAGCT
GGGTCAACCG ATACGCTCGA AGCGGACCAG TTGATTAAAG GGTATGCTAA ATTCGTTGCC
CCTGATACTG TAGAGGTGAA TGGTCAGCAG ATTCAAGGTG ATCGGATTAT TATCGCCACA
GGGTCTCGCC CGATTGTGCC AGAAGAATGG AGGTCACTGG AAGATAAATT GATTACCAGT
GATGAGTTGT TTGAGCTGGA AAGGCTTCCA AAGCGCATTG CGGTCATAGG ATTAGGAATT
ATTGGCTTGG AAATTGGCCA AGCACTTTCC CGGCTTGGTG TTGAGGTGAT CGGTTTTGAA
ATGTCAAATA CTCTTGGGGG ACTACAATCG CCTAAAGCTT CCCGGCAAGC GATTAAGTTA
ATCTCTAAAG AGTTCCCAAT TTACTTGGGT GAGGCGGCGA CAGTTGAACC CACGGGTGAA
GGTGTCAAAA TCACGGTCTC TTCGGGAACG TTTGAAGTGG ATGCCGTGTT TGCCTCGTTG
GGACGTCGTC CTAATCTCGA CAGTATTGAC CTTGAAAAAC TAGGGGTTGA GTTGGATGAA
ACAGGAATGC CGCCTTTTGA TATTCATACC ATGCAGGTGG CTAACCTCCC TGTTTTTATC
GCAGGGGACG TCAATGGATT TCGACCGATT CTGCACGAAG CCGGCCATGA AGGAAAAATA
GCGGTCAATA ACGCTATGGA TTACCCCGAA GTGACTTCGT ATAAGCGAAA AACGCCTTTA
GGGATTGCAT TTGTCGACCC TCAAATTGGC TTTTTCGGGG TGGGGTATGA ATCATTGGAT
TTGGATAAAA CGGTGGTTGT CGATTTTAAG CTTGAACGAA ACAATGGCCG AGCGATTGTG
ATGGGAGAAG ATAAAGGTGT GATTTCTCTT TATGCGGATA AAGCCTCTAA GCAGCTCATC
GGCGGTGAGC TGATGATGCC ACATGCCGAG CATTTTACCC ACCTTCTAAC GTGGGCCGTT
GAGCAGCAAC TTGAGGTGTT GGAATTGTTG CGAATGCCGT ATTACCATCC GGTATTAGAA
GAGGCTATTG AGTCCGCCAT AAGTATGTTG GCTGAGGCTT TATATACCGC TGATGAAATC
GAAGCATTGG ACACGTTACC TTCTAAATAA
|
|---|
| Protein sequence | MRRVKYIILG AGSSGLTALG RIRRETDDFV MINGGAFGTT CARVGCMPSK ALIHCAEHFH
ARKHFYDFGI DGADGLTIDH AAVMKRVRTF RDRFTSGVQA GSTDTLEADQ LIKGYAKFVA
PDTVEVNGQQ IQGDRIIIAT GSRPIVPEEW RSLEDKLITS DELFELERLP KRIAVIGLGI
IGLEIGQALS RLGVEVIGFE MSNTLGGLQS PKASRQAIKL ISKEFPIYLG EAATVEPTGE
GVKITVSSGT FEVDAVFASL GRRPNLDSID LEKLGVELDE TGMPPFDIHT MQVANLPVFI
AGDVNGFRPI LHEAGHEGKI AVNNAMDYPE VTSYKRKTPL GIAFVDPQIG FFGVGYESLD
LDKTVVVDFK LERNNGRAIV MGEDKGVISL YADKASKQLI GGELMMPHAE HFTHLLTWAV
EQQLEVLELL RMPYYHPVLE EAIESAISML AEALYTADEI EALDTLPSK
|
|---|
| |