Gene Tcr_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1484 
Symbol 
ID3761606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1602250 
End bp1603695 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content41% 
IMG OID637786215 
Producthypothetical protein 
Protein accessionYP_391750 
Protein GI78485825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCTT TGGTTTATTG CATTAAAAGG GTATTAAGAT TGTTTTGCTG TCTCAAAAAA 
TCATTCGGTT TATTGGGACG CGCCGTTTTA TTGCCATTGG CAATATTTGC CTACTCTGCC
CATGCGTTAT CTTTTGATGT TCCGGTAGAG CAAACACTGC CGTCAGATGA AAGTCCTCCG
CCCGCTAATC TTTCTTTAGA TCAGCAGATT AAACTGATTG ACCTTGAAAT TTTATTACTC
AAAGCAGAGC TTGCGCATAA AAATGCTCAG GTGGATCAAG TTCAAGCGTA TCTTTCTGAG
CTGAAGACTC AAGCCGAAGG AGTGGAACTG CCTTCTAACA TTCAAGACCG GATGATGGCT
TTGCAACATT ATTTAAGCCA ATCGAATTCC GTTGATGAAG CGCCGCAAGC ATTTGCGTTT
AAACCGGATA GGGTCTTGGC CGTTCTGCCT ATGTCAGGTC CTTATTCTCG TGCTGGTCAA
GAGCTTTATG ATGGGCTCAA GTCGTCATTA AAATCCACTT ACCCGAAAGC GAGTCTGGAA
GTTTTGGATT CCAATATTTA CGATTCCATG TTTGAAGCTT GGGAATGGAT TCGGCTTTAT
CAACCCAGTT TTATCTTTGG CCCCTTGGTG AAAGAAAATG TTGAAGCGCT TAACGCCTTA
GAGCCAAATG TGCCGATGCT GGTGTTTAAT GAGGTTAAAA AACCGAACGC TCTTATCAAA
ACCTTCGTAC CCTTATCAAA TAAGGATGCA ATAGATAAGT TGGTTGACTT AGTAAAAGAA
GCTCATTACC AACGTATTGT CGTCTTAACC GATGACTCGG ATAGCTCACA AGCTTTAATG
AGCGACTTTA AAAATCATTG GTTAGAGCAA AAAATGGATT ACCCGGTTGA TATTCAAGAG
CAACCAGTGG TTTCAAACGT CGATCAGGCG TTGGAAAAAG CCGTGAATTC AAGCCAGTCT
TCAGCTCGAA AGGCTTGGCT ACAAAGAACC ATTCGATCTA CCATTCAGTT TACAGAACGC
CCACGTCAAG ATCTTGAATT GGTGATTAGC TTTTTACCTT ACCGTCTTGC AATGCAAATT
TCACCTCTTT TAGAGTATTA CCACTTAAAC ACCATCCCGC ATTACTGGCT GCCATCTCAA
CGTCCAAGTG TTGATGAGTT CGTCGCCAGC CTTCCTTTCT GGCAAGCTAC CTCTGCCATT
CTTCCTGTCT CTTATGCTCG TTCCATTAAA CAAAATGATA AAAATACTGA TCAAAACGAT
CAGATTGGCA TTTTTTATGC TTTAGGTGAG TTGGCAGCAA AGGCTGTCAT TGAAACAACA
CGACAACACT CGATGGTAAT GAACACTCAA TTGGGTCAAT TAACCCTAGA TGAGGATCAA
AACATTCATT TTTATCCAGA AATATATTGG TTGGATACGG GTGTATTCGA AAAGTTAACT
GACTAG
 
Protein sequence
MMSLVYCIKR VLRLFCCLKK SFGLLGRAVL LPLAIFAYSA HALSFDVPVE QTLPSDESPP 
PANLSLDQQI KLIDLEILLL KAELAHKNAQ VDQVQAYLSE LKTQAEGVEL PSNIQDRMMA
LQHYLSQSNS VDEAPQAFAF KPDRVLAVLP MSGPYSRAGQ ELYDGLKSSL KSTYPKASLE
VLDSNIYDSM FEAWEWIRLY QPSFIFGPLV KENVEALNAL EPNVPMLVFN EVKKPNALIK
TFVPLSNKDA IDKLVDLVKE AHYQRIVVLT DDSDSSQALM SDFKNHWLEQ KMDYPVDIQE
QPVVSNVDQA LEKAVNSSQS SARKAWLQRT IRSTIQFTER PRQDLELVIS FLPYRLAMQI
SPLLEYYHLN TIPHYWLPSQ RPSVDEFVAS LPFWQATSAI LPVSYARSIK QNDKNTDQND
QIGIFYALGE LAAKAVIETT RQHSMVMNTQ LGQLTLDEDQ NIHFYPEIYW LDTGVFEKLT
D