Gene Tcr_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1478 
Symbol 
ID3761600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1597695 
End bp1598000 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content39% 
IMG OID637786209 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_391744 
Protein GI78485819 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTA AAAATATCAA TCAAAATTTA GTGAATAATC GCTTAAATGA TTCAGCGAAC 
AATTCACCAA AAGGGAATGC TACATCAACC CCTTCTGGAA CGCCTAAAAG TACTGATAAA
GTCACTTTGA CAGACGTATC CTCTCAGGTT AGTAACCTTG AGAAACAGGC GGCGGCAAGT
AATATTGATA ATTCGGCACG CATTGAAGAA CTGCGTGAAG CCATTAAAGA TGGAACCTAT
CAAGTTGATG CTGAAAAAGT GGCCAACAAG TTAATCCAAA CTGAAGCTCT ACTAGCGGGT
AGCTAA
 
Protein sequence
MDIKNINQNL VNNRLNDSAN NSPKGNATST PSGTPKSTDK VTLTDVSSQV SNLEKQAAAS 
NIDNSARIEE LREAIKDGTY QVDAEKVANK LIQTEALLAG S