| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1463 |
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| Symbol | |
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| ID | 3761943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1581851 |
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| End bp | 1583092 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786194 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_391729 |
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| Protein GI | 118139518 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTATTCC ATAAAACCAT TACGTATTTG ATTGTTGCTT CAATGATTCT ACTGGGTGTC
AGTAGCGGTC TGATGGTGTC TTTCGAACAA TGGGTCATTG CACAAACACA AGCAAAGGAA
ACCACTCCCT CTTTACCTCT TTCCGTTGAG TCTGGTATTC GTCATATGGT GTCTTCAACG
CCTAAAAAAC GAACAGTTGT CGAATCGTTT AGCGCAGAGT CTAATACGGG GTTCGAGCCC
ACAATTAATG AACCCCTTAA GAACCCATCA TCATCGGATG AAAAACGAGA TGTTGCTTTT
GTAGCCGATC AGTCCAATTC CTTTAAACCA GCTCCACTAA AGCCTTCCCA AACACAAGAT
GTATCACAAT TGCATCCGGT TTTAGTGGTG TATAAAGACG AATTGATTAT TGAATTTCCA
AAGGCGATTG CTTCGACTAA AAATATTAAA AATGCGGTCA GCCGCGTTTT ATTGCTCAGT
CACCCTTTAT CGGATCATGA TCTGTTATCA AAAGAAAGCC TCGTTTTGTC GGGTAAACCT
TACTTTTATC GTAAAGCACT CGATCAACAC AAACAACCTA TTCGATACCC GAAACAAGCC
TTTGACTATG CGGGGTATTT AATTGAACAT CATGCTGAAG AAATCAAAGA TGAAGAAGGC
GAGTTTATTG CGCTTCATAT CCCTTTGGTT GAGAGTGGCC TCACGGGACC TGCAAAAAAT
TACCAGGCCT GGGTGAAAGA CTATGCGGAT GAGTTTGATG TGCCTCCTTC TTTGGTTTAT
GCGGTGATGG AAACGGAAAG TGCTTTTAAT CCGCGAGCGG TCAGCCGATC AAATGCCATT
GGATTAATGC AGCTCAAGCC AGAGGCGGCG GGGCGTGATG TTTATCAATA CATTGATGCA
AAGCCGGGGC AGCCAAGCCA AAACGATCTG TTCGACTCCA AGAATAATAT CCGTATGGGA
ACGGCTTATC TGAGTTTGCT AAAACATGAT TATCTCTCTA ATATAGTGGA TGATAAAATT
AAGCAAATGG TCACCATTTC TTCTTATAAT GGAGGCCTAA CCACGGTGCT TGGACTGTTT
GGTAAAACCC CGGAAAAAGC GGTTGAACGT TTGAATAAAA TGAAACCGAA TCAAGTGTAT
CGTAAATTAC GTTACGACCA TCAATCGGAT GAAACGCGTC GATATTTAGA TAAGGTCTTA
AAAGCGGAAA CCAAATACCG AGCGTTATTG AACGAAGTTT AA
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| Protein sequence | MLFHKTITYL IVASMILLGV SSGLMVSFEQ WVIAQTQAKE TTPSLPLSVE SGIRHMVSST
PKKRTVVESF SAESNTGFEP TINEPLKNPS SSDEKRDVAF VADQSNSFKP APLKPSQTQD
VSQLHPVLVV YKDELIIEFP KAIASTKNIK NAVSRVLLLS HPLSDHDLLS KESLVLSGKP
YFYRKALDQH KQPIRYPKQA FDYAGYLIEH HAEEIKDEEG EFIALHIPLV ESGLTGPAKN
YQAWVKDYAD EFDVPPSLVY AVMETESAFN PRAVSRSNAI GLMQLKPEAA GRDVYQYIDA
KPGQPSQNDL FDSKNNIRMG TAYLSLLKHD YLSNIVDDKI KQMVTISSYN GGLTTVLGLF
GKTPEKAVER LNKMKPNQVY RKLRYDHQSD ETRRYLDKVL KAETKYRALL NEV
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