Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1406 |
Symbol | |
ID | 3760772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1519058 |
End bp | 1519411 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637786140 |
Product | SmpA/OmlA |
Protein accession | YP_391675 |
Protein GI | 78485750 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC CAGTCAAAAC AGCTTTATTT CTGAGCCTAT CGCTCAGTTT ACTTACCTTA AGTGGGTGTT CATTTTTCAC ACCTTATAAG GCCACCATCA CTCAAGGCAC GGTCATCAGT CAAGAAGCCA TTAATACGCT TCAACCTGGC TTAACAGCAA ACCAAGTCAA AGACATACTT GGTCCGCCTT TAGGACAAGA CCCATTTAAC CCTTATCACT GGGAATATGT GTTCTATACA ACCGATCCAG ACTTTCATCC TGATGCCGTT CGCCACCTAG TCGTCAATTT TGACAGTGAA CAATATCTAG ACAACTGGAA AGTGGTACCA CAGAAAGTTA CCCTAAAAAA CTAA
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Protein sequence | MNKPVKTALF LSLSLSLLTL SGCSFFTPYK ATITQGTVIS QEAINTLQPG LTANQVKDIL GPPLGQDPFN PYHWEYVFYT TDPDFHPDAV RHLVVNFDSE QYLDNWKVVP QKVTLKN
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