Gene Tcr_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1406 
Symbol 
ID3760772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1519058 
End bp1519411 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content42% 
IMG OID637786140 
ProductSmpA/OmlA 
Protein accessionYP_391675 
Protein GI78485750 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC CAGTCAAAAC AGCTTTATTT CTGAGCCTAT CGCTCAGTTT ACTTACCTTA 
AGTGGGTGTT CATTTTTCAC ACCTTATAAG GCCACCATCA CTCAAGGCAC GGTCATCAGT
CAAGAAGCCA TTAATACGCT TCAACCTGGC TTAACAGCAA ACCAAGTCAA AGACATACTT
GGTCCGCCTT TAGGACAAGA CCCATTTAAC CCTTATCACT GGGAATATGT GTTCTATACA
ACCGATCCAG ACTTTCATCC TGATGCCGTT CGCCACCTAG TCGTCAATTT TGACAGTGAA
CAATATCTAG ACAACTGGAA AGTGGTACCA CAGAAAGTTA CCCTAAAAAA CTAA
 
Protein sequence
MNKPVKTALF LSLSLSLLTL SGCSFFTPYK ATITQGTVIS QEAINTLQPG LTANQVKDIL 
GPPLGQDPFN PYHWEYVFYT TDPDFHPDAV RHLVVNFDSE QYLDNWKVVP QKVTLKN