Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1368 |
Symbol | |
ID | 3760754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1482119 |
End bp | 1484107 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786102 |
Product | potassium efflux system protein |
Protein accession | YP_391637 |
Protein GI | 78485712 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.164343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGACC ACATTCTGCT GAATATTGTT TTTTTACTGG TCATTACGGT TGGATTAGTT TCCATTTCTC GTCGTTTTCA CCTCCCACCT ATTTTAAATT ACATTCTTGT CGGGATTATC GTCGGCCCTT TTGGCTTCGG ATTAATTGAA AGTGAAAAAA GCATCAGTTT TCTCGCAGAA TTCGGCATCG TTTTCCTGTT GTTCTCTATT GGTTTGGAAT TTTCCCTCAC ACAAATGATG TCCATGCGAA AAATGGTGTT CGGTTATGGA GGGTTACAGG TTTTATTAAC GGGGGCTTTC GTCTATCTCA CCTGTCAGAT GTTTGGACTC GACATCGAAA CCAGCATCGT GGTTGCGAGT GCGTTTGCAT TATCATCAAC CGCCATTGTC ATCAAGCAAC TGACCGAACA ATCTGAAATA CAAACCCGTC ATGGTCGTGC CGCTGTTGGT GTCTTAATCT TCCAAGACCT TATGGCAATC CCTTTATTAA TCCTAATTCC AGCACTGGGA ACCGCCAGTG GTGACTCGCT TTCCTCTGAA TTGGGCATTG CCTTCTTAAA AGGTGGTATC GTGGTCGTGG TCATGCTGTT TGCGGGTCGA TACTTGTTAA GACCCCTCTT CCATGAAGTG GCCTCTTCAA AATCTCAAGA ACTGTTTACC TTAACGGTCT TAACCGTGGT TTTAAGTGCG GCTGCCTTTA CCGAAGAGAT GGATATCTCT ATGACACTTG GGGCCTTTTT AGCAGGGATG ATGCTTGGGG AAACTGAATA CCGACACCAA ATTGAGGCTG ACATTCGTCC TTTCCAAGAC ATCCTGTTAG GTCTTTTCTT CATCACTGTC GGAATGATGA TTTCACCGGC TGTCTTACAA AGCGATTTCT TTATTATCAT TACGATTACG TTCAGCATCA TGCTCATTAA AGCTGTGGTG ATTTTCGGTA TTATGAAAAC CTTCAAAAAA CCGGAAGGCG TCAGCATTCG TGCGGCGGTA TCGTTGGCTC AAGTAGGTGA ATTTGGACTG GTGTTAATTA CGCTCGCACT GTCTTATGAA CTGCTTTCTG GCGAACTGGG ACAAATCCTA TTAACCTCAG CTGTGCTTAG TATGATGATC ACGCCACTGC TGGTAAAATT TAATGGCCGC ATTGCGAATC GACTCTGCCG AAAAAGTTAC CAGAACAATT TTTCGGAACT GGAAAATGTC ATTAAAGAAG ACACGAAATA TTTAGCTGAC CATGTTGTAT TGCTCGGGTT CGGTCGTGTC GGACAGACCA CAGCAAAGTT TCTCGAACAA GCTCACGTGC CTTTCGTTGC ACTAGATATG GATATCAAGC GTGTGCACGA AGCACAACAA AGTGGCGAAC CCGTTTATTT TGGGGACTCC GCTAAACACA GCATTATTAA AGCCACTAAT TTAAGTAAGG CAAAAGTAGC CATTATTACC TTCCATAACT ATCATGCGGC CATTAAAACA CTGAAAACCT TAAAAGATGT CGCACCCGAA TTACCCATTC TAGTTAGAAC GCAAGATGAC AGCCACATCA ATGAACTCAT GGCAGCAGGT GCAACTGAAG TGGTGCCGGA CACATTTGAA TCCAGCATCA TGTTGGCATC GCATTTGTTA CTGATGATTG GTCAGCCACC TAGCCAAGTT CTTCGACAAA CACGAGCTGC TCGAAAAGGT CGTTATAGTT TGCTAAATGG GATGTACCCG GGTGAATCCG ACCATACTCC TTTTGATAAT GCTCAGATAG GACAGGTCAT TCAACCAATC CAAATCAATG ATTCCGCTTT TGCCGTTGGC AAACGATTAG AAGAATTGCC TTTTTCCAAG CTTAACATCA ACATTAAATC GGTGAAGCGT GGTTCCGTTC GAGGAGATGA TCCGGATGTA CGTACGCGAA TTCGCGCTGC AGATGTCTTG ATTGTGCAAG GACTGCCAGA AAATGTTGAT AAGTTTGAAA ACTATTTAAA CAGCGGAAAA CAGCCGTAA
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Protein sequence | MFDHILLNIV FLLVITVGLV SISRRFHLPP ILNYILVGII VGPFGFGLIE SEKSISFLAE FGIVFLLFSI GLEFSLTQMM SMRKMVFGYG GLQVLLTGAF VYLTCQMFGL DIETSIVVAS AFALSSTAIV IKQLTEQSEI QTRHGRAAVG VLIFQDLMAI PLLILIPALG TASGDSLSSE LGIAFLKGGI VVVVMLFAGR YLLRPLFHEV ASSKSQELFT LTVLTVVLSA AAFTEEMDIS MTLGAFLAGM MLGETEYRHQ IEADIRPFQD ILLGLFFITV GMMISPAVLQ SDFFIIITIT FSIMLIKAVV IFGIMKTFKK PEGVSIRAAV SLAQVGEFGL VLITLALSYE LLSGELGQIL LTSAVLSMMI TPLLVKFNGR IANRLCRKSY QNNFSELENV IKEDTKYLAD HVVLLGFGRV GQTTAKFLEQ AHVPFVALDM DIKRVHEAQQ SGEPVYFGDS AKHSIIKATN LSKAKVAIIT FHNYHAAIKT LKTLKDVAPE LPILVRTQDD SHINELMAAG ATEVVPDTFE SSIMLASHLL LMIGQPPSQV LRQTRAARKG RYSLLNGMYP GESDHTPFDN AQIGQVIQPI QINDSAFAVG KRLEELPFSK LNINIKSVKR GSVRGDDPDV RTRIRAADVL IVQGLPENVD KFENYLNSGK QP
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