Gene Tcr_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1352 
Symbol 
ID3760510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1467840 
End bp1468688 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content42% 
IMG OID637786084 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_391621 
Protein GI78485696 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000782528 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTT CTTACGTTTT AACAGTTTCT TGCCCTGATA AAATCGGCAT TGTTTCCAAG 
GTCTCTACGT TTTTAGCCGA TCATCAATGC ATGATTACAG AGGCAAATCA TCATGCAGAT
GAAGAATTGG GCATGTTTTT CATGCGTAAC GAAATTTCCA ACCTGAATAT GTCGGAAGAA
AGCTTCAAAT TGAAGTTTTT GGATATTGCT CAACAATTTG ATATGCAGTG GAAGCTCTCT
TCAGGCGCTA AGAAGAAACG TGTCATTATT ATGGTAAGCA AACAGGATCA TTGTTTGTAT
GACCTGCTTT ACCGTTGGAA ATCAGGCGAG ATGGACTATG ACATCCCATG CGTAATTTCC
AATCATCTTG ATTTGAAAGG ACTTGTTGAG TGGCACGGCA TCCCTTATGT GCATATTCCT
GTTACCCCTG ACAACAAATC ACAGGCCTTT TCAGAAGTGG TGAAATGGGT GGAACATTAT
CAGGCCGATA CCATTGTATT GGCTCGTTAC ATGCAGATTA TTCCGCCTGA CTTATGCCGT
AAATATCCTG GTCAGATTAT TAATATCCAC CACAGTTTTT TGCCGTCTTT TATTGGTGCT
AGACCCTACC ATCAAGCATT TGAACGAGGT GTGAAGTTGA TTGGTGCAAC TTGTCACTAT
GTTACTGAAG AGCTAGATGC TGGCCCAATT ATCGAACAGG ATGTAAGGCG TGTTTCCCAT
AGCGAATCCG CAGATGAAAT GGTGGTGCTT GGTAAGGACG TAGAAAAGAA CGCGCTCGCG
CGAGGCCTTA AACATCACTT GGAAGACCGC GTTCTTTTGA GTGGTAATAA AACCATCGTA
TTCGCTTAG
 
Protein sequence
MSASYVLTVS CPDKIGIVSK VSTFLADHQC MITEANHHAD EELGMFFMRN EISNLNMSEE 
SFKLKFLDIA QQFDMQWKLS SGAKKKRVII MVSKQDHCLY DLLYRWKSGE MDYDIPCVIS
NHLDLKGLVE WHGIPYVHIP VTPDNKSQAF SEVVKWVEHY QADTIVLARY MQIIPPDLCR
KYPGQIINIH HSFLPSFIGA RPYHQAFERG VKLIGATCHY VTEELDAGPI IEQDVRRVSH
SESADEMVVL GKDVEKNALA RGLKHHLEDR VLLSGNKTIV FA