Gene Tcr_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1302 
Symbol 
ID3760684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1419522 
End bp1420124 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID637786034 
Producthypothetical protein 
Protein accessionYP_391571 
Protein GI78485646 
COG category[S] Function unknown 
COG ID[COG3647] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.189923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAT GGGCTTGGTT GACTGTTTTT GGTTTGGTTG CGATGTGGTC TGGCATTGGC 
TCAAAAGACA CTGAAATTTG GTGGTTGGAA GCGGGGCCGG CCATTATTGG TATGATCGTG 
ATCGCGCTGA CGTATCAGTC GTTTCGTCTT ACGTCATTGC TTTATGTGCT GATCTTATTA 
CACATGATTG TGCTTTTTGT TGGAGCACAC TATACCTATG CCGAAGTGCC GCTTTTTGAT 
TGGATTGGGC AGCTATCAGG TCAAGAACGG AATAACTACG ATAAGTTAGG GCATTTAATG 
CAAGGCTTGG TTCCTACTCT GATTGCTCGA GAAATTTTAA TGCGGAAAAA CATTATTCAA 
AGTCAGGCCT GGTTAAATTT CTTTGCCGCA ACGTTTGCTT TAGCCTTGAG TGCGTTTTAT 
GAGCTCGTTG AGTGGTGGGT TGCATTGGTC AGTGAAGAAG CGGCAGAGGC CTTTTTAGGA 
ATGCAGGGCT ATGAATGGGA TACGCAGTCT GATATGGCGT ATGCATTGCT GGGAGCCATC 
CTGGCATTGG TGTTTTTCAA GCGTCTTCAT GATCGACAGC TTAAGGAAAA ATTAACACCA 
TAG
 
Protein sequence
MLKWAWLTVF GLVAMWSGIG SKDTEIWWLE AGPAIIGMIV IALTYQSFRL TSLLYVLILL 
HMIVLFVGAH YTYAEVPLFD WIGQLSGQER NNYDKLGHLM QGLVPTLIAR EILMRKNIIQ 
SQAWLNFFAA TFALALSAFY ELVEWWVALV SEEAAEAFLG MQGYEWDTQS DMAYALLGAI 
LALVFFKRLH DRQLKEKLTP