Gene Tcr_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1290 
Symbol 
ID3760672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1406209 
End bp1406553 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content38% 
IMG OID637786022 
Producthypothetical protein 
Protein accessionYP_391559 
Protein GI78485634 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1393] Arsenate reductase and related proteins, glutaredoxin family 
TIGRFAM ID[TIGR01617] transcriptional regulator, Spx/MgsR family 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC TATTTGGTAT TTCAAACTGT GACACGGTTC GAAAAGCGAA AAAGTGGCTT 
GAAGCCAATC AGATTGATTT CGAGTACATC GATTTTCGAA AAAATCAATT TTCTAAAGAA
CACATTGACG ATTGGTTAAA AAAAGTCAAC TTTGAAGACA TCGTTAACCA GCGCAGCCAA
GCGTGGAAAG CATTAACAGA TGCGCAAAAA CATGATTTAA TAGAAAACAA ACAGCTTGCT
TTATTACTCG AAACACCGAC GTTGATTAAA CGTCCCGTGT TACAAACGTC CGAAGCCGTA
CTCTTTGGGT TTAAAGAAGC GCAGTACCAA GCACAATTTG CTTAA
 
Protein sequence
MNKLFGISNC DTVRKAKKWL EANQIDFEYI DFRKNQFSKE HIDDWLKKVN FEDIVNQRSQ 
AWKALTDAQK HDLIENKQLA LLLETPTLIK RPVLQTSEAV LFGFKEAQYQ AQFA