| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1248 |
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| Symbol | |
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| ID | 3761804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1362273 |
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| End bp | 1364066 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637785980 |
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| Product | phosphoesterase, RecJ-like |
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| Protein accession | YP_391517 |
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| Protein GI | 78485592 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAT ATCCCAAAAA ACCGCTCATT ACCGAACGAA CACCTTCCGA CAAAATACAC
CAAGCCGCCC TCTCGCTTGG TTTATCAGAG CTACAAGCCA AACTGGTAGC CAGCCGATTA
ACCGAAGCGG ATTTCAGTCA TGATAACATG CCCGAAGAAT TGCAAAAAAT CGTTTTTCCG
AAGCTGCAAT ACCTTCAACA CCCGGAACAA CTTAAGAATG CCAAACAAGC TGCCGAGTTA
ATCGCTGATG CCGTTGAGTC AGATGGAAAA ATTGTCTTAG CAACCGATTA CGATACCGAT
GGCGTCACCT CTGCCTGGGT CGCGACTCGG GCGCTCATTG ATTATTTTGG TGTGTCGCCC
GAACGAATCG AACACATGAT TGGTGAGCGC AAAGAAGGAT ACGGCATTAC CGAAGAAGTT
GTGAACCGTA TTTTGGCGAT TAAAGGCTCA ATTGACCTGG TTATTTCGGC TGACCAAGGG
TCCAGTGACG AGCCTCGAAT TAAAAGACTG GCTGACGCCG GTATTAAAGT GTGTGTAACA
GACCACCACC AAATGACGAC TGAAGGCGCA CCACCGAGTG CCGCCTGCAC AGTCAACCCT
CAACAAGCAG GCTGCGACTA CGATAAAACC GTTGCGGGCT GTTTTGTTAT CTTTTTGGTT
ATGGGACAAA CGCGCACGGA ATTGATCCGC AGACAGGTGA TTCCTGAAAC CACCCCTTCT
TTAAAAGATT TAACGCAAAA TATTGCATTA GGTACGGTGG CGGACAGTGT CAGCCTGAAG
AGTGTTAATA ATCGTGCCAT TGTCCAAGCC GGTTTGGCCG CCATCAATCA GTTTTCACAC
CCTGCTTGGC AAGCTCTCCA GAAAATGAAC GACAATCAAG GTCAACCCTT TAACGCCGAA
TACCTCGGCT TTCAAGTAGC CACCCGAATC AATGCAGCAA GCCGCGTCAG TGATGTCACC
ACGGCGTTTA AGTTCTTAAA TGCCTCCAGC TTAGAGCAAG CCACCCCACT GCTGGCGCAA
CTGGATCAAG ACAACTTGGA TCGCCGCAGC CAGCAAGAAG GCATGCTAAA GCAAGCCCGT
GAAACGGCTG AAGCGCTGTA TCACGAAAAT AAGTTTACCT TAAGCATTCG AATGACAGGC
AATGCCGGCA TCCAAGGGAT TATTGCATCG CGAATTGGCG AGCAATACGG TGTACCAACC
ATCGCGATGA CCGATCTGGA AGATGGCTAT CTCGCTGGAA GCGGGCGTGG GATTGTAAGC
AACATTGATT TACGAGAAGC ATTTCAAACA ATGGCGGAAC GCCACCCTGG TCTGTTCAAA
TCCATGGGTG GCCACAAAGG CGCCGCTGGC TGTATGATCC CCATTGAAAA GTTTGATATT
TTTTCAACCT TATTTGAAGA AACCATTCAA GAACAACTGA ACCACACTGT TCCAATCCCG
ACCATTGAAA CAGATGGTCG GTTAACCGGA CGGCAACTGA CGCCTTCGCT TATTCAAGAA
CTCAATCTAT TAGAACCTTA TGGAAGAGAA TGGCCTAAAC CATTGTTTTC AGGAGTTTTT
GAGATCCAAG ACCTGCGACC GGTCGGTCAA ACAAAAACAC ATTTATCTTT CAAGCTGCGT
TCTGATGATC GTCAAATTAT TTCCGCGATA TTTTTTAACG CCAAGCCTAC GGCCGAAGCG
CCAGATGGAT TTTCGATAGG TGAAAAAGTG GAATGCGCTT ATCAACCGAG TTTAAATACT
TTCTACGGAA AGACATCTCT ACAACTCAAA GTCGTTGCGA TGAATTCCTT GTAA
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| Protein sequence | MLKYPKKPLI TERTPSDKIH QAALSLGLSE LQAKLVASRL TEADFSHDNM PEELQKIVFP
KLQYLQHPEQ LKNAKQAAEL IADAVESDGK IVLATDYDTD GVTSAWVATR ALIDYFGVSP
ERIEHMIGER KEGYGITEEV VNRILAIKGS IDLVISADQG SSDEPRIKRL ADAGIKVCVT
DHHQMTTEGA PPSAACTVNP QQAGCDYDKT VAGCFVIFLV MGQTRTELIR RQVIPETTPS
LKDLTQNIAL GTVADSVSLK SVNNRAIVQA GLAAINQFSH PAWQALQKMN DNQGQPFNAE
YLGFQVATRI NAASRVSDVT TAFKFLNASS LEQATPLLAQ LDQDNLDRRS QQEGMLKQAR
ETAEALYHEN KFTLSIRMTG NAGIQGIIAS RIGEQYGVPT IAMTDLEDGY LAGSGRGIVS
NIDLREAFQT MAERHPGLFK SMGGHKGAAG CMIPIEKFDI FSTLFEETIQ EQLNHTVPIP
TIETDGRLTG RQLTPSLIQE LNLLEPYGRE WPKPLFSGVF EIQDLRPVGQ TKTHLSFKLR
SDDRQIISAI FFNAKPTAEA PDGFSIGEKV ECAYQPSLNT FYGKTSLQLK VVAMNSL
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