Gene Tcr_1234 details

Gene Information

• Locus tag: Tcr_1234
• ID: 3761790
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 1350246
• End bp: 1350707
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637785966
• Product: putative prophage repressor
• Protein accession: YP_391503
• Protein GI: 78485578
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000000530915
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAACG TTGCTTATCT TATTCCCAAA CGTAATCAAA AATTGCAATT GGAAGCCGCT 
GATCCCGTAG AGCTGGTGGA ATATGATTTT GTGCAGGTCC CATTACTGGG GTGGACTTCT 
GCTGGGGAGC CCATTCAAAT GGAAATGGAT TACGACACGG TTTCCGTTCC TCACAGCATG 
GTTCGTAAAG AAACCTTTGC CCTTCGCGTC AAAGGGAGTT CCATGATTGA GGAAAACATT 
GAAGACGGAG ACATTGTCAT TATTGAACGC CGTTCAACGG CTGAAAATGG CGAATCCGTC 
GTGGTTCGCA TCAATAATGA AGAAGTCACG ATGAAAAAGT TTTACATCGA AAAAAACGGT 
ATTCGACTCC AGCCTGCCAA TGCCGACATG GAACCCATTT ACATTACCAA TGAAAACATT 
GAAATTTTAG GGATTGTCAC CGGCATTTTA CGCCAACCTT GA 

 

Protein sequence

MSNVAYLIPK RNQKLQLEAA DPVELVEYDF VQVPLLGWTS AGEPIQMEMD YDTVSVPHSM 
VRKETFALRV KGSSMIEENI EDGDIVIIER RSTAENGESV VVRINNEEVT MKKFYIEKNG 
IRLQPANADM EPIYITNENI EILGIVTGIL RQP