Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1211 |
Symbol | |
ID | 3760629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1323807 |
End bp | 1325642 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785939 |
Product | Sodium/hydrogen exchanger |
Protein accession | YP_391480 |
Protein GI | 78485555 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0280603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGAAT ATCTTTCCAT CCCCTTACAA CTGAGTTTAT TAGTCCTTTT TGGCATGCTT TCACAATGGC TTGGCTGGAA GCTGCGCTTG CCTGCTATTA TCTTTTTATT GCTGGTTGGC ATCCTTTTAG GGCCTGTTTT AGAGTGGTTG AATCCGGATG TGTTACTAGG AGACTTACTG TTTCCTTTTG TCTCGCTTGG GGTGGCAATT ATTCTGTTTG AAGGCAGCCT GACGCTCCGG TTTTCTGAAA TCAAAGGGGT TAAGTATTAC ATTCGAAACT TAACCACCAT CGGGGTTTTG ATCACTTGGA TAGTGATGGC GGTTGGCGCA CATTACTTGG CTTCTCTTGA CTGGCCGATT GCCTTTTTGT TTGGAGCGAT TGTCACAGTG ACCGGCCCGA CCGTGATTAT GCCAATGCTG AGATCAATGA AGATCACTGA ACGGGTTGGC AGTGTATTAC GTTGGGAAGG CATCATCATT GATCCCATTG GAGCAATGCT TGCCATTCTG GTCTATGTCT TTATTGTGTC TTCCGCAAAC CACACGGATG TGCTGCTGAC CTTTCTAGAA CTGATTGCCA TCGGGTCTGC CTTAGGACTT TTAGGCGGTT GGTTTATTGC AAAATGCTTG AAAAATCATT GGATACCAAA CTACCTCACC AACTTTTTCA GTTTAACCGT CGTTCTATTA ATGTTTACGG TTTCCAATCA AATTTCACAT GAATCAGGTC TCGTTGCCGT TACAGTCATG GGGATTTATC TCGCAAATCA GAAAGATATC AGCATGCACT CGATTCTCGA TTTTAAAGAG CATTTGACCG TGTTACTCAT TTCACTGCTG TTCATTGTGC TCGCTGCGCG AATGGATTTT GACCTGTTAT TCTCATTAAG TTGGTCCGCT CTTTTATTGC TGGTCATCGC TCAATTTGTT GCCCGTCCCC TCTCGGTTTT CATTTCCACC ATTGGGGGCA AAGAACTGAA ACTAAATGAG CTGATTTTGC TGTCATGGAT TTCCCCACGA GGTATCGTAG CCGCGGCCAT TTCAGCATTA TTCGCGATTC GTTTGGAGGA AAATGGCATT TCCGGTGCGG AAACGATTTT GCCGCTGGTC TTCATCATGA TTATGGGAAC CGTATTATTC CAGTCTTTAA CCGCCGGCTT TATTGCTCGA AAACTCAAAC TTTCTCACAT TGATACTCAG GGTGCACTTA TTGTCGGCTC GAATAAGGTC TCCATTGCCA TTGCACAAGC ATTGAAAGAT CAAGGGCTTG AAGTGATGAT TGCCACTCAA AGCCGAGCAG CCGATAAGGA AGCGAAAATG CACGGCATCA AAACTTATTA TGGTGACCTT CTCAGCAAAA AAGCCGAATT GTATCTCGAT ATCAACCCTT ATAAGGTCAT GCTTTTAATG GACTTTAAAT CCGAGCTGCA TCCTCTGTAT TACACTCATT TTAGAGCCGA TTTTGGTCCT GAAAATATTT ATGCTCTCAG TACGGTGCCC TCTTCTGAAA TATCGGAAGA AAAAAGCTTA AGCACCAACC TTAACCCACG AGTGTTGTTT GGAGATGAAG TGACCTGGCC AATGTTGTCC AACCTCATCA ATCAAGGAGC GGAGGTTAAG GCGACCAACA TCACAGAGAG TTTTTCATTT AACGACTATC AGGAATACTG GCAGAATAAG GCCATCCCTC TTTTTGCGAT TTCTCCCAAG GAAGAATTTT ATATTTTCGC CGAAGATTCA AGCATGAAGA TAGAGGCCGG CTGGAAAATT GGGGCCTTAG TGTTAGATAC AAAGAAAGAC ACACCCAAAA AAGAACTCCC CGAAAAGAAA AAATAA
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Protein sequence | MFEYLSIPLQ LSLLVLFGML SQWLGWKLRL PAIIFLLLVG ILLGPVLEWL NPDVLLGDLL FPFVSLGVAI ILFEGSLTLR FSEIKGVKYY IRNLTTIGVL ITWIVMAVGA HYLASLDWPI AFLFGAIVTV TGPTVIMPML RSMKITERVG SVLRWEGIII DPIGAMLAIL VYVFIVSSAN HTDVLLTFLE LIAIGSALGL LGGWFIAKCL KNHWIPNYLT NFFSLTVVLL MFTVSNQISH ESGLVAVTVM GIYLANQKDI SMHSILDFKE HLTVLLISLL FIVLAARMDF DLLFSLSWSA LLLLVIAQFV ARPLSVFIST IGGKELKLNE LILLSWISPR GIVAAAISAL FAIRLEENGI SGAETILPLV FIMIMGTVLF QSLTAGFIAR KLKLSHIDTQ GALIVGSNKV SIAIAQALKD QGLEVMIATQ SRAADKEAKM HGIKTYYGDL LSKKAELYLD INPYKVMLLM DFKSELHPLY YTHFRADFGP ENIYALSTVP SSEISEEKSL STNLNPRVLF GDEVTWPMLS NLINQGAEVK ATNITESFSF NDYQEYWQNK AIPLFAISPK EEFYIFAEDS SMKIEAGWKI GALVLDTKKD TPKKELPEKK K
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