| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1188 |
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| Symbol | |
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| ID | 3760606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1299682 |
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| End bp | 1300380 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785916 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_391457 |
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| Protein GI | 78485532 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTATTT ATTTAATCAC TGGTGCGGCG CAAGGGCTGG GTCGCAGTTT AAGTTTAGCG
TTAGCCAAAG AAAACAACCA ATTGATTTTA TTAGATAAAG ATTTAAAAGC TTTAAACTAT
TTATACGATG AAATTAGTAA CTCGAATGAG TTGATGGCGG AACCGGCACT TTATCCGATG
GATTTACTCG GCGCGAACAT TGATCATTAT CAAACTTTGA CAGCAACGCT TGGGACAGAA
TATGGACGTT TGGATGGGGT TTTCTTAAAT GCAGCCACCC TGCCGGCATT TACACCGATT
GAACACTTTG ATTACACGCA ATGGTACGAA GTGTTGCACA CCAACCTGAA TGCGAACTTT
CATTTGATTC AGCAAACCCT TCCATTGTTG AAACAAGCGG ATAAAAGTTT AATGGTGGCG
GTGTTGGATC AAAACATTGA AGAACACCCG GCTTATTATG GTGCTTACGG TGTTGCGAAG
GCAGGGTTAG AACAGCTTAT GAAAACCACC GCCACAGAAA ACCCAGGAAC TGCGGTTCGT
TTTTACAATG CCAAGCTCGA GGCCTTTCAA TCAAATACCC GCAGCCGTCA GTTTCCAAGT
GAAAACCCAG CCACCCTTCC TACATCTGAT GCCATCGCTC GGCAATTACT GAATGTGGTA
CTGGAGGGAT TGACATCGGA GTCCATTGAA AAACTTTAA
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| Protein sequence | MSIYLITGAA QGLGRSLSLA LAKENNQLIL LDKDLKALNY LYDEISNSNE LMAEPALYPM
DLLGANIDHY QTLTATLGTE YGRLDGVFLN AATLPAFTPI EHFDYTQWYE VLHTNLNANF
HLIQQTLPLL KQADKSLMVA VLDQNIEEHP AYYGAYGVAK AGLEQLMKTT ATENPGTAVR
FYNAKLEAFQ SNTRSRQFPS ENPATLPTSD AIARQLLNVV LEGLTSESIE KL
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