| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1139 |
|---|
| Symbol | |
|---|
| ID | 3762127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1231923 |
|---|
| End bp | 1232345 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637785860 |
|---|
| Product | dual specificity protein phosphatase |
|---|
| Protein accession | YP_391408 |
|---|
| Protein GI | 78485483 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAC CGCGCGCAGA ACAACTACAG CAAGACATTC TTTCCTACAA AGAGCAAGGC
GTCACCCATG TCGTCAGCCT TTTAAAACCG ACTGAGGTCG AAGCGTTTCA AATGACGGAA
GAAGCTGCTG TCTGCAAAGC CCACCAACTT TCATTTACCC ATTTTCCAAT CAAAGATATG
GACGTGCCTG AGATATCGGC ATTAAAAGAA TTAAATCTGC AATTAAAACA ACAGCTCGCC
AAAGAAGGCC ACATTGCCAT TCATTGCCAT GGTGGACGCG GTCGAGCTGG AATCGTGGCC
ATTAGCTTAA TGATAGAACA CGGTTATGAT GCGACTGAAG CCATGAAAAT TGCCTCCGAA
GCACGTGGAG ACAAGATGCC GGTTTGCGAC CTTCAAGTCG AGTTCATTCA CGCTTATCGT
TAA
|
|---|
| Protein sequence | MPKPRAEQLQ QDILSYKEQG VTHVVSLLKP TEVEAFQMTE EAAVCKAHQL SFTHFPIKDM
DVPEISALKE LNLQLKQQLA KEGHIAIHCH GGRGRAGIVA ISLMIEHGYD ATEAMKIASE
ARGDKMPVCD LQVEFIHAYR
|
|---|
| |