Gene Tcr_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1126 
Symbol 
ID3762067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1215502 
End bp1216332 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content42% 
IMG OID637785847 
Producthypothetical protein 
Protein accessionYP_391395 
Protein GI78485470 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGAT ATAACCCTGA TTTACCATTA GTGGATACGC GCAGTTTTGA TGCGTTTAAA 
GAAAGTCATT TCAAGTTGGC CACTCACTTG CCTTGGCCGG AATTAAAATT GCGATTGAAT
GAGCTTCCTG CACGGCCTGC TAAATTACAA CTTGTTGCAG ATGGCGCGAA CCTTCAAGAT
GCCCAACAAT TTTTGATAGA AAAAGGTTAT GAAGTTGTAG GGTGTTTTTC CAACCTGGAA
TACCAGACGG TTATTCAAAA TTTACCAGGC CTGGCTGTTT CTGGAACCGA ATCCCGTAAT
TTATGGTCGC CCAGTCCGCT GATTGAAACG TTTGTAACGA ACTATGCTGA GAAAACGTTT
TCCAAAACAA AACCTTTCGC AATCGATATT GGGTGTGGTG GGGGACGTGA TGCGGTTTAC
TTGTCTATGA ACGGCTGGCA GGTAACAGGC ATTGATCATA AAGAAACGGT GATGCAGCGT
GCTAAGCAAC TGGCAAAGTT TCATCAGCAA GACATTGAAT GGAAAACCTG TTCCGTTAAA
ACGCCCAATT GTTTGCCCAG TCAACCCGTT GACCTTGTTG TGGTCATTCG ATACCTCAAT
CGGGCATTAT TTGATACCTT TAAAACCATG TTAAAACCGA ATGGTTATGT GGTGTTCCAA
ACCTTTGTTG AAGGCGTGGA AGCATTTGGT TCGCCTAAAA ATCCAAATTA TATTTTGAAA
AAAGGGGAAC TGGCAAAAAC CTTTGACGAT TTTCGTATAA TTGTTGATAG AATAGACACA
CTAAATGATG GACGCCCTGT CGCATCCTTT ATTGCTCAAA AGATAAAATA A
 
Protein sequence
MMGYNPDLPL VDTRSFDAFK ESHFKLATHL PWPELKLRLN ELPARPAKLQ LVADGANLQD 
AQQFLIEKGY EVVGCFSNLE YQTVIQNLPG LAVSGTESRN LWSPSPLIET FVTNYAEKTF
SKTKPFAIDI GCGGGRDAVY LSMNGWQVTG IDHKETVMQR AKQLAKFHQQ DIEWKTCSVK
TPNCLPSQPV DLVVVIRYLN RALFDTFKTM LKPNGYVVFQ TFVEGVEAFG SPKNPNYILK
KGELAKTFDD FRIIVDRIDT LNDGRPVASF IAQKIK